Table 1
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Overrepresented cis-elements in the promotors of CDT-induced and -repressed genes

RankDiscovered motifE valueName of matched motif in ArabidopsisTarget sequences with motif (%)
CDT induced1GAAGAAGAA2.4e-25BPC517.03
2SAAAAAAAA (S = C/G)1.2e-18REM1918.76
3CTCTCTCTCT1.9e-11BPC114.03
4GMCACGTGKC (M = C/A, K = G/T)2.4e-11ABF27.65
5GCCACGTCAGC1.0e-10bHLH10415.42
6TCGCCGGARA (R = G/A)9.5e-009Trihelix4.73
CDT suppressed1AAAAAAAA2.1e-028REM1917.05
2GAAGAAGAA2.4e-18BPC514.39
3CACGTGGCA7.8e-15ABI532.75
4AAACCCTAAA6.6e-13MYB related19.97
5AATAATAATAAWWW (W = A/T)7.8e-12ATHB1329.68
6TATATATATAYATAW (Y = T/C, W = A/T)1.0e-11ARID13.73
RankDiscovered motifE valueName of matched motif in ArabidopsisTarget sequences with motif (%)
CDT induced1GAAGAAGAA2.4e-25BPC517.03
2SAAAAAAAA (S = C/G)1.2e-18REM1918.76
3CTCTCTCTCT1.9e-11BPC114.03
4GMCACGTGKC (M = C/A, K = G/T)2.4e-11ABF27.65
5GCCACGTCAGC1.0e-10bHLH10415.42
6TCGCCGGARA (R = G/A)9.5e-009Trihelix4.73
CDT suppressed1AAAAAAAA2.1e-028REM1917.05
2GAAGAAGAA2.4e-18BPC514.39
3CACGTGGCA7.8e-15ABI532.75
4AAACCCTAAA6.6e-13MYB related19.97
5AATAATAATAAWWW (W = A/T)7.8e-12ATHB1329.68
6TATATATATAYATAW (Y = T/C, W = A/T)1.0e-11ARID13.73
Table 1
Open in new tab

Overrepresented cis-elements in the promotors of CDT-induced and -repressed genes

RankDiscovered motifE valueName of matched motif in ArabidopsisTarget sequences with motif (%)
CDT induced1GAAGAAGAA2.4e-25BPC517.03
2SAAAAAAAA (S = C/G)1.2e-18REM1918.76
3CTCTCTCTCT1.9e-11BPC114.03
4GMCACGTGKC (M = C/A, K = G/T)2.4e-11ABF27.65
5GCCACGTCAGC1.0e-10bHLH10415.42
6TCGCCGGARA (R = G/A)9.5e-009Trihelix4.73
CDT suppressed1AAAAAAAA2.1e-028REM1917.05
2GAAGAAGAA2.4e-18BPC514.39
3CACGTGGCA7.8e-15ABI532.75
4AAACCCTAAA6.6e-13MYB related19.97
5AATAATAATAAWWW (W = A/T)7.8e-12ATHB1329.68
6TATATATATAYATAW (Y = T/C, W = A/T)1.0e-11ARID13.73
RankDiscovered motifE valueName of matched motif in ArabidopsisTarget sequences with motif (%)
CDT induced1GAAGAAGAA2.4e-25BPC517.03
2SAAAAAAAA (S = C/G)1.2e-18REM1918.76
3CTCTCTCTCT1.9e-11BPC114.03
4GMCACGTGKC (M = C/A, K = G/T)2.4e-11ABF27.65
5GCCACGTCAGC1.0e-10bHLH10415.42
6TCGCCGGARA (R = G/A)9.5e-009Trihelix4.73
CDT suppressed1AAAAAAAA2.1e-028REM1917.05
2GAAGAAGAA2.4e-18BPC514.39
3CACGTGGCA7.8e-15ABI532.75
4AAACCCTAAA6.6e-13MYB related19.97
5AATAATAATAAWWW (W = A/T)7.8e-12ATHB1329.68
6TATATATATAYATAW (Y = T/C, W = A/T)1.0e-11ARID13.73
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