Table 2

Taxonomic classification of bacterial isolates using two approaches.

SILVA SINA (16S rRNA) [58]GTDB-Tk (whole genome) [59]Isolate identifier in manuscript
ClassificationIdentitya (%)ClassificationIdentitya (%)
1Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;99.85Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;inhibens DSM 1637497.93Phaeobacter inhibens i.
2Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;100Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;flavus DSM 1642197.93Erytherobacter flavus i.
3Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter;99.45Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter; sp. EhC0699.99Marinobacter sp. i.
4Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.92Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;pontiacus DSM 1001497.28Sulfitobacter pontiacus i.
5Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;99.79Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;macleodii ATCC 2712697.86Alteromonas macleodii i.
6Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.49Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;geojensis MM-12496.32Sulfitobacter geojensis i.
SILVA SINA (16S rRNA) [58]GTDB-Tk (whole genome) [59]Isolate identifier in manuscript
ClassificationIdentitya (%)ClassificationIdentitya (%)
1Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;99.85Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;inhibens DSM 1637497.93Phaeobacter inhibens i.
2Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;100Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;flavus DSM 1642197.93Erytherobacter flavus i.
3Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter;99.45Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter; sp. EhC0699.99Marinobacter sp. i.
4Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.92Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;pontiacus DSM 1001497.28Sulfitobacter pontiacus i.
5Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;99.79Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;macleodii ATCC 2712697.86Alteromonas macleodii i.
6Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.49Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;geojensis MM-12496.32Sulfitobacter geojensis i.
a

The sequence identity is computed as the number of shared bases (common base-column pairs) divided by the length of the query sequence.

Table 2

Taxonomic classification of bacterial isolates using two approaches.

SILVA SINA (16S rRNA) [58]GTDB-Tk (whole genome) [59]Isolate identifier in manuscript
ClassificationIdentitya (%)ClassificationIdentitya (%)
1Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;99.85Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;inhibens DSM 1637497.93Phaeobacter inhibens i.
2Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;100Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;flavus DSM 1642197.93Erytherobacter flavus i.
3Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter;99.45Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter; sp. EhC0699.99Marinobacter sp. i.
4Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.92Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;pontiacus DSM 1001497.28Sulfitobacter pontiacus i.
5Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;99.79Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;macleodii ATCC 2712697.86Alteromonas macleodii i.
6Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.49Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;geojensis MM-12496.32Sulfitobacter geojensis i.
SILVA SINA (16S rRNA) [58]GTDB-Tk (whole genome) [59]Isolate identifier in manuscript
ClassificationIdentitya (%)ClassificationIdentitya (%)
1Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;99.85Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Phaeobacter;inhibens DSM 1637497.93Phaeobacter inhibens i.
2Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;100Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;flavus DSM 1642197.93Erytherobacter flavus i.
3Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter;99.45Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Marinobacteraceae;Marinobacter; sp. EhC0699.99Marinobacter sp. i.
4Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.92Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;pontiacus DSM 1001497.28Sulfitobacter pontiacus i.
5Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;99.79Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacterales;Alteromonadaceae;Alteromonas;macleodii ATCC 2712697.86Alteromonas macleodii i.
6Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;99.49Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Sulfitobacter;geojensis MM-12496.32Sulfitobacter geojensis i.
a

The sequence identity is computed as the number of shared bases (common base-column pairs) divided by the length of the query sequence.

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