Table 1.
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Sources of Human Immunodeficiency Virus Genome Sequences

PairPartnerTime Between Donor and Recipient Samples, dFiebig StageNo. of Single HIV GenomesNo. of Unique Rev Amino Acid SequencesNo. of Unique RRE Nucleotide SequencesNo. of Unique Rev-RRE PairsSequence Accession Nos.Participant Code in ReferenceReference
ADonor19…2091217KY112094–KY112126CH0212Iyer et al [11]
Recipient3608714JX972986–JX972998, JX973019–JX973074CH0162
BDonor6…1891617KR820367–KR820384Z3678FDeymier et al [16]
Recipient29122KR820385–KR820393Z3678M
CDonor47…38151623KY112322–KY112359CH0492Iyer et al [11]
Recipient1–233256KY112218–KY112250CH0427
DDonor265…416914KY112015–KY112055CH1064Iyer et al [11]
Recipient412234KX216883–KX216893, KX216895CH0848
EDonor0…188412KR820422–KR820439Z4473FDeymier et al [16]
Recipient210122KR820440–KR820449Z4473M
FDonor23…178813KR820341–KR820357Z3618FDeymier et al [16]
Recipient29223KR820358–KR820366Z3618M
GDonor65…39132733KY112390–KY112428CH0596Iyer et al [11]
Recipient318324KY111965–KY111982CH0455
HDonor7…2181416KR820394–KR820414Z4248FDeymier et al [16]
Recipient27111KR820415–KR820421Z4248M
IDonor3…2071115KR820294–KR820313Z331FDeymier et al [16]
Recipient210212KR820314–KR820323Z331M
PairPartnerTime Between Donor and Recipient Samples, dFiebig StageNo. of Single HIV GenomesNo. of Unique Rev Amino Acid SequencesNo. of Unique RRE Nucleotide SequencesNo. of Unique Rev-RRE PairsSequence Accession Nos.Participant Code in ReferenceReference
ADonor19…2091217KY112094–KY112126CH0212Iyer et al [11]
Recipient3608714JX972986–JX972998, JX973019–JX973074CH0162
BDonor6…1891617KR820367–KR820384Z3678FDeymier et al [16]
Recipient29122KR820385–KR820393Z3678M
CDonor47…38151623KY112322–KY112359CH0492Iyer et al [11]
Recipient1–233256KY112218–KY112250CH0427
DDonor265…416914KY112015–KY112055CH1064Iyer et al [11]
Recipient412234KX216883–KX216893, KX216895CH0848
EDonor0…188412KR820422–KR820439Z4473FDeymier et al [16]
Recipient210122KR820440–KR820449Z4473M
FDonor23…178813KR820341–KR820357Z3618FDeymier et al [16]
Recipient29223KR820358–KR820366Z3618M
GDonor65…39132733KY112390–KY112428CH0596Iyer et al [11]
Recipient318324KY111965–KY111982CH0455
HDonor7…2181416KR820394–KR820414Z4248FDeymier et al [16]
Recipient27111KR820415–KR820421Z4248M
IDonor3…2071115KR820294–KR820313Z331FDeymier et al [16]
Recipient210212KR820314–KR820323Z331M

Abbreviations: HIV, human immunodeficiency virus; RRE, Rev response element.

Table 1.
Open in new tab

Sources of Human Immunodeficiency Virus Genome Sequences

PairPartnerTime Between Donor and Recipient Samples, dFiebig StageNo. of Single HIV GenomesNo. of Unique Rev Amino Acid SequencesNo. of Unique RRE Nucleotide SequencesNo. of Unique Rev-RRE PairsSequence Accession Nos.Participant Code in ReferenceReference
ADonor19…2091217KY112094–KY112126CH0212Iyer et al [11]
Recipient3608714JX972986–JX972998, JX973019–JX973074CH0162
BDonor6…1891617KR820367–KR820384Z3678FDeymier et al [16]
Recipient29122KR820385–KR820393Z3678M
CDonor47…38151623KY112322–KY112359CH0492Iyer et al [11]
Recipient1–233256KY112218–KY112250CH0427
DDonor265…416914KY112015–KY112055CH1064Iyer et al [11]
Recipient412234KX216883–KX216893, KX216895CH0848
EDonor0…188412KR820422–KR820439Z4473FDeymier et al [16]
Recipient210122KR820440–KR820449Z4473M
FDonor23…178813KR820341–KR820357Z3618FDeymier et al [16]
Recipient29223KR820358–KR820366Z3618M
GDonor65…39132733KY112390–KY112428CH0596Iyer et al [11]
Recipient318324KY111965–KY111982CH0455
HDonor7…2181416KR820394–KR820414Z4248FDeymier et al [16]
Recipient27111KR820415–KR820421Z4248M
IDonor3…2071115KR820294–KR820313Z331FDeymier et al [16]
Recipient210212KR820314–KR820323Z331M
PairPartnerTime Between Donor and Recipient Samples, dFiebig StageNo. of Single HIV GenomesNo. of Unique Rev Amino Acid SequencesNo. of Unique RRE Nucleotide SequencesNo. of Unique Rev-RRE PairsSequence Accession Nos.Participant Code in ReferenceReference
ADonor19…2091217KY112094–KY112126CH0212Iyer et al [11]
Recipient3608714JX972986–JX972998, JX973019–JX973074CH0162
BDonor6…1891617KR820367–KR820384Z3678FDeymier et al [16]
Recipient29122KR820385–KR820393Z3678M
CDonor47…38151623KY112322–KY112359CH0492Iyer et al [11]
Recipient1–233256KY112218–KY112250CH0427
DDonor265…416914KY112015–KY112055CH1064Iyer et al [11]
Recipient412234KX216883–KX216893, KX216895CH0848
EDonor0…188412KR820422–KR820439Z4473FDeymier et al [16]
Recipient210122KR820440–KR820449Z4473M
FDonor23…178813KR820341–KR820357Z3618FDeymier et al [16]
Recipient29223KR820358–KR820366Z3618M
GDonor65…39132733KY112390–KY112428CH0596Iyer et al [11]
Recipient318324KY111965–KY111982CH0455
HDonor7…2181416KR820394–KR820414Z4248FDeymier et al [16]
Recipient27111KR820415–KR820421Z4248M
IDonor3…2071115KR820294–KR820313Z331FDeymier et al [16]
Recipient210212KR820314–KR820323Z331M

Abbreviations: HIV, human immunodeficiency virus; RRE, Rev response element.

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