Estimate of biosynthetic cluster genes and biocontrol activity of the B. paralicheniformis 2R5.
| Biosynthetic cluster genes . | ||||||
|---|---|---|---|---|---|---|
| Region . | From . | To . | Most similar known cluster . | . | Type . | Similarity . |
| Rg 1.1 | 217 680 | 240 141 | None | Lassopeptide | ||
| Rg 1.2 | 460 805 | 507 971 | Bacillibactin | NRP | NRPS | 53% |
| Rg 2.1 | 1 | 39 645 | Fengycin | NRP | NRPS | 66% |
| Rg 4.1 | 191 123 | 256 560 | Lichenysin | NRP | NRPS | 100% |
| Rg 5.1 | 237 721 | 258 470 | None | CDPS | ||
| Rg 6.1 | 112 577 | 122 921 | None | RiPP-like | ||
| Rg 6.2 | 217 154 | 300 043 | Bacitracin | NRP | NRPS | 100% |
| Rg 7.1 | 1 | 21 912 | Fengycin | NRP | NRPS | 20% |
| Rg 7.2 | 117 215 | 139 104 | None | terpene | ||
| Rg 7.3 | 192 252 | 233 349 | None | T3PKS | ||
| Rg 9.1 | 86 793 | 128 035 | Butirosin A / butirosin B | Saccharide | thiopeptide, RiPP-like | 7% |
| Rg 10.1 | 36 241 | 51 704 | None | siderophore | ||
| Rg 12.1 | 1 | 25 573 | Haloduracin β / haloduracin α | RiPP: lanthipeptide | Lanthipeptide-class-ii, cyclic-lactone-autoinducer | 40% |
| Rg 20.1 | 1 | 13 425 | Fengycin | NRP | NRPS | 20% |
| Inhibition of plant pathogens | ||||||
| A. alternata | B. cinerea | F. culmorum | F. oxysporum | F. solani | P. cactorum | P. megasperma |
| 24% | 13% | 18% | 19% | 17% | 20% | 0% |
| Biosynthetic cluster genes . | ||||||
|---|---|---|---|---|---|---|
| Region . | From . | To . | Most similar known cluster . | . | Type . | Similarity . |
| Rg 1.1 | 217 680 | 240 141 | None | Lassopeptide | ||
| Rg 1.2 | 460 805 | 507 971 | Bacillibactin | NRP | NRPS | 53% |
| Rg 2.1 | 1 | 39 645 | Fengycin | NRP | NRPS | 66% |
| Rg 4.1 | 191 123 | 256 560 | Lichenysin | NRP | NRPS | 100% |
| Rg 5.1 | 237 721 | 258 470 | None | CDPS | ||
| Rg 6.1 | 112 577 | 122 921 | None | RiPP-like | ||
| Rg 6.2 | 217 154 | 300 043 | Bacitracin | NRP | NRPS | 100% |
| Rg 7.1 | 1 | 21 912 | Fengycin | NRP | NRPS | 20% |
| Rg 7.2 | 117 215 | 139 104 | None | terpene | ||
| Rg 7.3 | 192 252 | 233 349 | None | T3PKS | ||
| Rg 9.1 | 86 793 | 128 035 | Butirosin A / butirosin B | Saccharide | thiopeptide, RiPP-like | 7% |
| Rg 10.1 | 36 241 | 51 704 | None | siderophore | ||
| Rg 12.1 | 1 | 25 573 | Haloduracin β / haloduracin α | RiPP: lanthipeptide | Lanthipeptide-class-ii, cyclic-lactone-autoinducer | 40% |
| Rg 20.1 | 1 | 13 425 | Fengycin | NRP | NRPS | 20% |
| Inhibition of plant pathogens | ||||||
| A. alternata | B. cinerea | F. culmorum | F. oxysporum | F. solani | P. cactorum | P. megasperma |
| 24% | 13% | 18% | 19% | 17% | 20% | 0% |
Rg—region, NRPS—nonribosomal peptide synthetases, RiPP—ribosomally synthesized and post-translationally modified peptide, NRP—nonribosomal peptide.
Estimate of biosynthetic cluster genes and biocontrol activity of the B. paralicheniformis 2R5.
| Biosynthetic cluster genes . | ||||||
|---|---|---|---|---|---|---|
| Region . | From . | To . | Most similar known cluster . | . | Type . | Similarity . |
| Rg 1.1 | 217 680 | 240 141 | None | Lassopeptide | ||
| Rg 1.2 | 460 805 | 507 971 | Bacillibactin | NRP | NRPS | 53% |
| Rg 2.1 | 1 | 39 645 | Fengycin | NRP | NRPS | 66% |
| Rg 4.1 | 191 123 | 256 560 | Lichenysin | NRP | NRPS | 100% |
| Rg 5.1 | 237 721 | 258 470 | None | CDPS | ||
| Rg 6.1 | 112 577 | 122 921 | None | RiPP-like | ||
| Rg 6.2 | 217 154 | 300 043 | Bacitracin | NRP | NRPS | 100% |
| Rg 7.1 | 1 | 21 912 | Fengycin | NRP | NRPS | 20% |
| Rg 7.2 | 117 215 | 139 104 | None | terpene | ||
| Rg 7.3 | 192 252 | 233 349 | None | T3PKS | ||
| Rg 9.1 | 86 793 | 128 035 | Butirosin A / butirosin B | Saccharide | thiopeptide, RiPP-like | 7% |
| Rg 10.1 | 36 241 | 51 704 | None | siderophore | ||
| Rg 12.1 | 1 | 25 573 | Haloduracin β / haloduracin α | RiPP: lanthipeptide | Lanthipeptide-class-ii, cyclic-lactone-autoinducer | 40% |
| Rg 20.1 | 1 | 13 425 | Fengycin | NRP | NRPS | 20% |
| Inhibition of plant pathogens | ||||||
| A. alternata | B. cinerea | F. culmorum | F. oxysporum | F. solani | P. cactorum | P. megasperma |
| 24% | 13% | 18% | 19% | 17% | 20% | 0% |
| Biosynthetic cluster genes . | ||||||
|---|---|---|---|---|---|---|
| Region . | From . | To . | Most similar known cluster . | . | Type . | Similarity . |
| Rg 1.1 | 217 680 | 240 141 | None | Lassopeptide | ||
| Rg 1.2 | 460 805 | 507 971 | Bacillibactin | NRP | NRPS | 53% |
| Rg 2.1 | 1 | 39 645 | Fengycin | NRP | NRPS | 66% |
| Rg 4.1 | 191 123 | 256 560 | Lichenysin | NRP | NRPS | 100% |
| Rg 5.1 | 237 721 | 258 470 | None | CDPS | ||
| Rg 6.1 | 112 577 | 122 921 | None | RiPP-like | ||
| Rg 6.2 | 217 154 | 300 043 | Bacitracin | NRP | NRPS | 100% |
| Rg 7.1 | 1 | 21 912 | Fengycin | NRP | NRPS | 20% |
| Rg 7.2 | 117 215 | 139 104 | None | terpene | ||
| Rg 7.3 | 192 252 | 233 349 | None | T3PKS | ||
| Rg 9.1 | 86 793 | 128 035 | Butirosin A / butirosin B | Saccharide | thiopeptide, RiPP-like | 7% |
| Rg 10.1 | 36 241 | 51 704 | None | siderophore | ||
| Rg 12.1 | 1 | 25 573 | Haloduracin β / haloduracin α | RiPP: lanthipeptide | Lanthipeptide-class-ii, cyclic-lactone-autoinducer | 40% |
| Rg 20.1 | 1 | 13 425 | Fengycin | NRP | NRPS | 20% |
| Inhibition of plant pathogens | ||||||
| A. alternata | B. cinerea | F. culmorum | F. oxysporum | F. solani | P. cactorum | P. megasperma |
| 24% | 13% | 18% | 19% | 17% | 20% | 0% |
Rg—region, NRPS—nonribosomal peptide synthetases, RiPP—ribosomally synthesized and post-translationally modified peptide, NRP—nonribosomal peptide.
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