Table 2.

Genome assembly statistics

MetricSweltsa coloradensis
Coverage35×
Ave. Kmer depth39
Assembly size1.48 Gbp
Total contigs21 523
Largest contig6.03 Mbp
N50 (contig)0.251 Mbp
L50 (contig)1276
N75 (contig)0.07 Mbp
L75 (contig)4263
Complete BUSCOs1580 (95.2%)
 Single copy1488
 Duplicated92
Fragmented BUSCOs37 (2.2%)
Missing BUSCOs41 (2.6%)
MetricSweltsa coloradensis
Coverage35×
Ave. Kmer depth39
Assembly size1.48 Gbp
Total contigs21 523
Largest contig6.03 Mbp
N50 (contig)0.251 Mbp
L50 (contig)1276
N75 (contig)0.07 Mbp
L75 (contig)4263
Complete BUSCOs1580 (95.2%)
 Single copy1488
 Duplicated92
Fragmented BUSCOs37 (2.2%)
Missing BUSCOs41 (2.6%)

N50 is the sequence length of the shortest contig of the set of contigs that represent 50% of the total genome length. L50 is the length of the contig in the set of contigs whose length sum makes up half of genome size.

Table 2.

Genome assembly statistics

MetricSweltsa coloradensis
Coverage35×
Ave. Kmer depth39
Assembly size1.48 Gbp
Total contigs21 523
Largest contig6.03 Mbp
N50 (contig)0.251 Mbp
L50 (contig)1276
N75 (contig)0.07 Mbp
L75 (contig)4263
Complete BUSCOs1580 (95.2%)
 Single copy1488
 Duplicated92
Fragmented BUSCOs37 (2.2%)
Missing BUSCOs41 (2.6%)
MetricSweltsa coloradensis
Coverage35×
Ave. Kmer depth39
Assembly size1.48 Gbp
Total contigs21 523
Largest contig6.03 Mbp
N50 (contig)0.251 Mbp
L50 (contig)1276
N75 (contig)0.07 Mbp
L75 (contig)4263
Complete BUSCOs1580 (95.2%)
 Single copy1488
 Duplicated92
Fragmented BUSCOs37 (2.2%)
Missing BUSCOs41 (2.6%)

N50 is the sequence length of the shortest contig of the set of contigs that represent 50% of the total genome length. L50 is the length of the contig in the set of contigs whose length sum makes up half of genome size.

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