Table 2

The results of herb clustering based on SARS-CoV-2 structural proteins

ProteinTop 10 herbsUnique drug set
SMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi FructusMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi Fructus, Fructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos, Common Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma, Herba Gnathali Affinis
EFructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos
MCommon Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma
NCarthami Flos, Peucedani Radix, Mori Folium, Hippophae Fructus, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Herbal Ephedra, Flower of Lobed Kudzuvine, Herba Gnathali Affinis, Perilla
ProteinTop 10 herbsUnique drug set
SMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi FructusMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi Fructus, Fructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos, Common Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma, Herba Gnathali Affinis
EFructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos
MCommon Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma
NCarthami Flos, Peucedani Radix, Mori Folium, Hippophae Fructus, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Herbal Ephedra, Flower of Lobed Kudzuvine, Herba Gnathali Affinis, Perilla
Table 2

The results of herb clustering based on SARS-CoV-2 structural proteins

ProteinTop 10 herbsUnique drug set
SMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi FructusMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi Fructus, Fructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos, Common Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma, Herba Gnathali Affinis
EFructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos
MCommon Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma
NCarthami Flos, Peucedani Radix, Mori Folium, Hippophae Fructus, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Herbal Ephedra, Flower of Lobed Kudzuvine, Herba Gnathali Affinis, Perilla
ProteinTop 10 herbsUnique drug set
SMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi FructusMori Folium, Hippophae Fructus, Carthami Flos, Peucedani Radix, Herbal Ephedra, Perilla, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Flower of Lobed Kudzuvine, Amomi Fructus, Fructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos, Common Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma, Herba Gnathali Affinis
EFructus Tribuli, Zanthoxyli Radix, Coralhead Plant Seed, Caulis Trachelospermi, Chicory Herb, Anemarrhenae Rhizoma, Common Cephalanoplos Herb, Radix Gentianae, Ussuriensis Fritillary Bulb, Inulae Flos
MCommon Macrocarpium Fruit, Modern Rose, Ginkgo Folium, Honeysuckle Flower, Forsythia Suspensa, Chrysanthemum, Rhizoma Dioscoreae Bulbiferae, Smilacis Chinae Rhizoma, Farfarae Flos, Smilacis Glabrae Rhizoma
NCarthami Flos, Peucedani Radix, Mori Folium, Hippophae Fructus, Rhododendri Daurici Folium, Lesser Galangal Rhizome, Herbal Ephedra, Flower of Lobed Kudzuvine, Herba Gnathali Affinis, Perilla
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