Statistics of the Gilia yorkii Contig, Scaffold, and Transcriptome Assemblies
| . | Genome Contig Assembly . | Genome Scaffold Assembly . | Transcriptome Assembly . |
|---|---|---|---|
| Length (Mb) | 2,753 | 2,754 | 192.63 |
| % of estimated genome size | 98.29 | 98.32 | NA |
| Contigs/scaffolds | 3,947 | 2,043 | 96,691 |
| Contig/scaffold N50 (Mb) | 2.54 | 285.77 | 0.0022 |
| Contig/scaffold L50 | 317 | 5 | 31,532 |
| Longest contig/scaffold (Mb) | 18.30 | 374.98 | 0.0099 |
| Complete BUSCO genes (%) | 1,330 (96.7) | 1,331 (96.8) | 1,322 (96.1) |
| Single copy (%) | 1,264 (91.9) | 1,271 (92.4) | 233 (16.9) |
| Complete, duplicate (%) | 66 (4.8) | 60 (4.4) | 1,089 (79.2) |
| Fragmented BUSCO genes (%) | 14 (1.0) | 11 (0.8) | 12 (0.9) |
| Missing BUSCO genes (%) | 31 (2.3) | 33 (2.4) | 41 (3.0) |
| Total BUSCO genes searched | 1,375 | 1,375 | 1,375 |
| . | Genome Contig Assembly . | Genome Scaffold Assembly . | Transcriptome Assembly . |
|---|---|---|---|
| Length (Mb) | 2,753 | 2,754 | 192.63 |
| % of estimated genome size | 98.29 | 98.32 | NA |
| Contigs/scaffolds | 3,947 | 2,043 | 96,691 |
| Contig/scaffold N50 (Mb) | 2.54 | 285.77 | 0.0022 |
| Contig/scaffold L50 | 317 | 5 | 31,532 |
| Longest contig/scaffold (Mb) | 18.30 | 374.98 | 0.0099 |
| Complete BUSCO genes (%) | 1,330 (96.7) | 1,331 (96.8) | 1,322 (96.1) |
| Single copy (%) | 1,264 (91.9) | 1,271 (92.4) | 233 (16.9) |
| Complete, duplicate (%) | 66 (4.8) | 60 (4.4) | 1,089 (79.2) |
| Fragmented BUSCO genes (%) | 14 (1.0) | 11 (0.8) | 12 (0.9) |
| Missing BUSCO genes (%) | 31 (2.3) | 33 (2.4) | 41 (3.0) |
| Total BUSCO genes searched | 1,375 | 1,375 | 1,375 |
Statistics of the Gilia yorkii Contig, Scaffold, and Transcriptome Assemblies
| . | Genome Contig Assembly . | Genome Scaffold Assembly . | Transcriptome Assembly . |
|---|---|---|---|
| Length (Mb) | 2,753 | 2,754 | 192.63 |
| % of estimated genome size | 98.29 | 98.32 | NA |
| Contigs/scaffolds | 3,947 | 2,043 | 96,691 |
| Contig/scaffold N50 (Mb) | 2.54 | 285.77 | 0.0022 |
| Contig/scaffold L50 | 317 | 5 | 31,532 |
| Longest contig/scaffold (Mb) | 18.30 | 374.98 | 0.0099 |
| Complete BUSCO genes (%) | 1,330 (96.7) | 1,331 (96.8) | 1,322 (96.1) |
| Single copy (%) | 1,264 (91.9) | 1,271 (92.4) | 233 (16.9) |
| Complete, duplicate (%) | 66 (4.8) | 60 (4.4) | 1,089 (79.2) |
| Fragmented BUSCO genes (%) | 14 (1.0) | 11 (0.8) | 12 (0.9) |
| Missing BUSCO genes (%) | 31 (2.3) | 33 (2.4) | 41 (3.0) |
| Total BUSCO genes searched | 1,375 | 1,375 | 1,375 |
| . | Genome Contig Assembly . | Genome Scaffold Assembly . | Transcriptome Assembly . |
|---|---|---|---|
| Length (Mb) | 2,753 | 2,754 | 192.63 |
| % of estimated genome size | 98.29 | 98.32 | NA |
| Contigs/scaffolds | 3,947 | 2,043 | 96,691 |
| Contig/scaffold N50 (Mb) | 2.54 | 285.77 | 0.0022 |
| Contig/scaffold L50 | 317 | 5 | 31,532 |
| Longest contig/scaffold (Mb) | 18.30 | 374.98 | 0.0099 |
| Complete BUSCO genes (%) | 1,330 (96.7) | 1,331 (96.8) | 1,322 (96.1) |
| Single copy (%) | 1,264 (91.9) | 1,271 (92.4) | 233 (16.9) |
| Complete, duplicate (%) | 66 (4.8) | 60 (4.4) | 1,089 (79.2) |
| Fragmented BUSCO genes (%) | 14 (1.0) | 11 (0.8) | 12 (0.9) |
| Missing BUSCO genes (%) | 31 (2.3) | 33 (2.4) | 41 (3.0) |
| Total BUSCO genes searched | 1,375 | 1,375 | 1,375 |
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