Table 2

Overview of miRNA sequencing reads

SampleTotal readsN% > 10%Low quality5′-Adapter contamine3′-Adapter null or insert nullWith poly A/T/G/CClean reads
Drought-sensitive plantsControl 133,928,632 (100%)371 (0%)81,721 (0.24%)33,287 (0.10%)1,377,648 (4.1%)53,145 (0.16%)32,382,460 (95%)
Control 231,905,071 (100%)360 (0 %)84,190 (0.26%)32,884 (0.10%)555,157 (1.7%)70,210 (0.22%)31,162,270 (98%)
Control 333,330,848 (100%)349 (0%)77,489 (0.23%)32,009 (0.10%)653,356 (2.0%)58,660 (0.18%)32,508,985 (98%)
Drought 132,537,917 (100%)347 (0%)82,237 (0.25%)27,717 (0.09%)875,074 (2.7%)37,609 (0.12%)31,514,933 (97%)
Drought 224,779,273 (100%)252 (0%)66,295 (0.27%)25,252 (0.10%)709,788 (2.9%)64,004 (0.26%)23,913,682 (97%)
Drought 330,900,174 (100%)328 (0%)75,907 (0.25%)34,188 (0.11%)775,123 (2.5%)67,303 (0.22%)29,947,325 (97%)
Drought-tolerant plantsControl 131,489,922 (100%)443 (0%)86,581 (0.27%)28,714 (0.090%)1,352,490 (4.3%)39,785 (0.13%)29,981,909 (95%)
Control 229,888,571 (100%)430 (0%)78,512 (0.26%)32,389 (0.11%)855,209 (2.9%)58,814 (0.20%)28,863,217 (97%)
Control 326,866,676 (100%)435 (0%)73,980 (0.28%)24,177 (0.090%)448,026 (1.7%)62,656 (0.23%)26,257,402 (98%)
Drought 129,371,046 (100%)444 (0%)73,889 (0.25%)31,098 (0.11%)504,062 (1.7%)51,860 (0.18%)28,709,693 (98%)
Drought 230,422,600 (100%)445 (0%)85,569 (0.28%)26,499 (0.090%)978,522 (3.2%)45,285 (0.15%)29,286,280 (96%)
Drought 333,456,352 (100%)479 (0%)82,842 (0.25%)28,253 (0.080%)1,266,189 (3.8%)29,138 (0.090%)32,049,451 (96%)
SampleTotal readsN% > 10%Low quality5′-Adapter contamine3′-Adapter null or insert nullWith poly A/T/G/CClean reads
Drought-sensitive plantsControl 133,928,632 (100%)371 (0%)81,721 (0.24%)33,287 (0.10%)1,377,648 (4.1%)53,145 (0.16%)32,382,460 (95%)
Control 231,905,071 (100%)360 (0 %)84,190 (0.26%)32,884 (0.10%)555,157 (1.7%)70,210 (0.22%)31,162,270 (98%)
Control 333,330,848 (100%)349 (0%)77,489 (0.23%)32,009 (0.10%)653,356 (2.0%)58,660 (0.18%)32,508,985 (98%)
Drought 132,537,917 (100%)347 (0%)82,237 (0.25%)27,717 (0.09%)875,074 (2.7%)37,609 (0.12%)31,514,933 (97%)
Drought 224,779,273 (100%)252 (0%)66,295 (0.27%)25,252 (0.10%)709,788 (2.9%)64,004 (0.26%)23,913,682 (97%)
Drought 330,900,174 (100%)328 (0%)75,907 (0.25%)34,188 (0.11%)775,123 (2.5%)67,303 (0.22%)29,947,325 (97%)
Drought-tolerant plantsControl 131,489,922 (100%)443 (0%)86,581 (0.27%)28,714 (0.090%)1,352,490 (4.3%)39,785 (0.13%)29,981,909 (95%)
Control 229,888,571 (100%)430 (0%)78,512 (0.26%)32,389 (0.11%)855,209 (2.9%)58,814 (0.20%)28,863,217 (97%)
Control 326,866,676 (100%)435 (0%)73,980 (0.28%)24,177 (0.090%)448,026 (1.7%)62,656 (0.23%)26,257,402 (98%)
Drought 129,371,046 (100%)444 (0%)73,889 (0.25%)31,098 (0.11%)504,062 (1.7%)51,860 (0.18%)28,709,693 (98%)
Drought 230,422,600 (100%)445 (0%)85,569 (0.28%)26,499 (0.090%)978,522 (3.2%)45,285 (0.15%)29,286,280 (96%)
Drought 333,456,352 (100%)479 (0%)82,842 (0.25%)28,253 (0.080%)1,266,189 (3.8%)29,138 (0.090%)32,049,451 (96%)
Table 2

Overview of miRNA sequencing reads

SampleTotal readsN% > 10%Low quality5′-Adapter contamine3′-Adapter null or insert nullWith poly A/T/G/CClean reads
Drought-sensitive plantsControl 133,928,632 (100%)371 (0%)81,721 (0.24%)33,287 (0.10%)1,377,648 (4.1%)53,145 (0.16%)32,382,460 (95%)
Control 231,905,071 (100%)360 (0 %)84,190 (0.26%)32,884 (0.10%)555,157 (1.7%)70,210 (0.22%)31,162,270 (98%)
Control 333,330,848 (100%)349 (0%)77,489 (0.23%)32,009 (0.10%)653,356 (2.0%)58,660 (0.18%)32,508,985 (98%)
Drought 132,537,917 (100%)347 (0%)82,237 (0.25%)27,717 (0.09%)875,074 (2.7%)37,609 (0.12%)31,514,933 (97%)
Drought 224,779,273 (100%)252 (0%)66,295 (0.27%)25,252 (0.10%)709,788 (2.9%)64,004 (0.26%)23,913,682 (97%)
Drought 330,900,174 (100%)328 (0%)75,907 (0.25%)34,188 (0.11%)775,123 (2.5%)67,303 (0.22%)29,947,325 (97%)
Drought-tolerant plantsControl 131,489,922 (100%)443 (0%)86,581 (0.27%)28,714 (0.090%)1,352,490 (4.3%)39,785 (0.13%)29,981,909 (95%)
Control 229,888,571 (100%)430 (0%)78,512 (0.26%)32,389 (0.11%)855,209 (2.9%)58,814 (0.20%)28,863,217 (97%)
Control 326,866,676 (100%)435 (0%)73,980 (0.28%)24,177 (0.090%)448,026 (1.7%)62,656 (0.23%)26,257,402 (98%)
Drought 129,371,046 (100%)444 (0%)73,889 (0.25%)31,098 (0.11%)504,062 (1.7%)51,860 (0.18%)28,709,693 (98%)
Drought 230,422,600 (100%)445 (0%)85,569 (0.28%)26,499 (0.090%)978,522 (3.2%)45,285 (0.15%)29,286,280 (96%)
Drought 333,456,352 (100%)479 (0%)82,842 (0.25%)28,253 (0.080%)1,266,189 (3.8%)29,138 (0.090%)32,049,451 (96%)
SampleTotal readsN% > 10%Low quality5′-Adapter contamine3′-Adapter null or insert nullWith poly A/T/G/CClean reads
Drought-sensitive plantsControl 133,928,632 (100%)371 (0%)81,721 (0.24%)33,287 (0.10%)1,377,648 (4.1%)53,145 (0.16%)32,382,460 (95%)
Control 231,905,071 (100%)360 (0 %)84,190 (0.26%)32,884 (0.10%)555,157 (1.7%)70,210 (0.22%)31,162,270 (98%)
Control 333,330,848 (100%)349 (0%)77,489 (0.23%)32,009 (0.10%)653,356 (2.0%)58,660 (0.18%)32,508,985 (98%)
Drought 132,537,917 (100%)347 (0%)82,237 (0.25%)27,717 (0.09%)875,074 (2.7%)37,609 (0.12%)31,514,933 (97%)
Drought 224,779,273 (100%)252 (0%)66,295 (0.27%)25,252 (0.10%)709,788 (2.9%)64,004 (0.26%)23,913,682 (97%)
Drought 330,900,174 (100%)328 (0%)75,907 (0.25%)34,188 (0.11%)775,123 (2.5%)67,303 (0.22%)29,947,325 (97%)
Drought-tolerant plantsControl 131,489,922 (100%)443 (0%)86,581 (0.27%)28,714 (0.090%)1,352,490 (4.3%)39,785 (0.13%)29,981,909 (95%)
Control 229,888,571 (100%)430 (0%)78,512 (0.26%)32,389 (0.11%)855,209 (2.9%)58,814 (0.20%)28,863,217 (97%)
Control 326,866,676 (100%)435 (0%)73,980 (0.28%)24,177 (0.090%)448,026 (1.7%)62,656 (0.23%)26,257,402 (98%)
Drought 129,371,046 (100%)444 (0%)73,889 (0.25%)31,098 (0.11%)504,062 (1.7%)51,860 (0.18%)28,709,693 (98%)
Drought 230,422,600 (100%)445 (0%)85,569 (0.28%)26,499 (0.090%)978,522 (3.2%)45,285 (0.15%)29,286,280 (96%)
Drought 333,456,352 (100%)479 (0%)82,842 (0.25%)28,253 (0.080%)1,266,189 (3.8%)29,138 (0.090%)32,049,451 (96%)
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