| Type . | Assembly name . | Size (Mbp) . | % Genome . | No. markers . | Markers retained . |
|---|---|---|---|---|---|
| Scaffold | S01 | 62.45 | 11.64 | 464 | 168 |
| S02 | 51.27 | 9.56 | 430 | 141 | |
| S03 | 51.75 | 9.65 | 491 | 194 | |
| S04 | 49.09 | 9.15 | 510 | 211 | |
| S05 | 46.64 | 8.70 | 459 | 174 | |
| S06 | 44.69 | 8.33 | 323 | 137 | |
| S07 | 44.57 | 8.31 | 375 | 149 | |
| S08 | 38.13 | 7.11 | 335 | 133 | |
| S09 | 37.15 | 6.93 | 328 | 125 | |
| S10 | 40.48 | 7.55 | 428 | 194 | |
| S11 | 31.60 | 5.89 | 381 | 139 | |
| S12 | 30.25 | 5.64 | 322 | 130 | |
| Contig | X1059 | 0.02 | 0.004 | 1 | 0 |
| X1121 | 0.01 | 0.003 | 1 | 0 | |
| X1124 | 0.01 | 0.003 | 1 | 0 | |
| X1181 | 0.01 | 0.001 | 1 | 1 | |
| X233 | 0.12 | 0.023 | 1 | 0 | |
| X321 | 0.45 | 0.084 | 1 | 0 | |
| X368 | 0.05 | 0.009 | 1 | 0 | |
| X394_1 | 1.35 | 0.251 | 22 | 18 | |
| X394_2 | 0.94 | 0.175 | 6 | 4 | |
| X394_3 | 0.12 | 0.023 | 2 | 1 | |
| X713 | 0.01 | 0.001 | 1 | 0 | |
| Scaffold | 528.07 | 98.457 | 4,846 | 1,895 | |
| Targeted Contig | 3.10 | 0.578 | 38 | 24 | |
| Not Targeted Contig | 5.17 | 0.964 | —— | —— | |
| Type . | Assembly name . | Size (Mbp) . | % Genome . | No. markers . | Markers retained . |
|---|---|---|---|---|---|
| Scaffold | S01 | 62.45 | 11.64 | 464 | 168 |
| S02 | 51.27 | 9.56 | 430 | 141 | |
| S03 | 51.75 | 9.65 | 491 | 194 | |
| S04 | 49.09 | 9.15 | 510 | 211 | |
| S05 | 46.64 | 8.70 | 459 | 174 | |
| S06 | 44.69 | 8.33 | 323 | 137 | |
| S07 | 44.57 | 8.31 | 375 | 149 | |
| S08 | 38.13 | 7.11 | 335 | 133 | |
| S09 | 37.15 | 6.93 | 328 | 125 | |
| S10 | 40.48 | 7.55 | 428 | 194 | |
| S11 | 31.60 | 5.89 | 381 | 139 | |
| S12 | 30.25 | 5.64 | 322 | 130 | |
| Contig | X1059 | 0.02 | 0.004 | 1 | 0 |
| X1121 | 0.01 | 0.003 | 1 | 0 | |
| X1124 | 0.01 | 0.003 | 1 | 0 | |
| X1181 | 0.01 | 0.001 | 1 | 1 | |
| X233 | 0.12 | 0.023 | 1 | 0 | |
| X321 | 0.45 | 0.084 | 1 | 0 | |
| X368 | 0.05 | 0.009 | 1 | 0 | |
| X394_1 | 1.35 | 0.251 | 22 | 18 | |
| X394_2 | 0.94 | 0.175 | 6 | 4 | |
| X394_3 | 0.12 | 0.023 | 2 | 1 | |
| X713 | 0.01 | 0.001 | 1 | 0 | |
| Scaffold | 528.07 | 98.457 | 4,846 | 1,895 | |
| Targeted Contig | 3.10 | 0.578 | 38 | 24 | |
| Not Targeted Contig | 5.17 | 0.964 | —— | —— | |
Targeted scaffolds and unintegrated contigs and their respective size (Mbp), percentage of the genome, number of SNPs targeted, and number of SNPs retained for the final linkage map.
| Type . | Assembly name . | Size (Mbp) . | % Genome . | No. markers . | Markers retained . |
|---|---|---|---|---|---|
| Scaffold | S01 | 62.45 | 11.64 | 464 | 168 |
| S02 | 51.27 | 9.56 | 430 | 141 | |
| S03 | 51.75 | 9.65 | 491 | 194 | |
| S04 | 49.09 | 9.15 | 510 | 211 | |
| S05 | 46.64 | 8.70 | 459 | 174 | |
| S06 | 44.69 | 8.33 | 323 | 137 | |
| S07 | 44.57 | 8.31 | 375 | 149 | |
| S08 | 38.13 | 7.11 | 335 | 133 | |
| S09 | 37.15 | 6.93 | 328 | 125 | |
| S10 | 40.48 | 7.55 | 428 | 194 | |
| S11 | 31.60 | 5.89 | 381 | 139 | |
| S12 | 30.25 | 5.64 | 322 | 130 | |
| Contig | X1059 | 0.02 | 0.004 | 1 | 0 |
| X1121 | 0.01 | 0.003 | 1 | 0 | |
| X1124 | 0.01 | 0.003 | 1 | 0 | |
| X1181 | 0.01 | 0.001 | 1 | 1 | |
| X233 | 0.12 | 0.023 | 1 | 0 | |
| X321 | 0.45 | 0.084 | 1 | 0 | |
| X368 | 0.05 | 0.009 | 1 | 0 | |
| X394_1 | 1.35 | 0.251 | 22 | 18 | |
| X394_2 | 0.94 | 0.175 | 6 | 4 | |
| X394_3 | 0.12 | 0.023 | 2 | 1 | |
| X713 | 0.01 | 0.001 | 1 | 0 | |
| Scaffold | 528.07 | 98.457 | 4,846 | 1,895 | |
| Targeted Contig | 3.10 | 0.578 | 38 | 24 | |
| Not Targeted Contig | 5.17 | 0.964 | —— | —— | |
| Type . | Assembly name . | Size (Mbp) . | % Genome . | No. markers . | Markers retained . |
|---|---|---|---|---|---|
| Scaffold | S01 | 62.45 | 11.64 | 464 | 168 |
| S02 | 51.27 | 9.56 | 430 | 141 | |
| S03 | 51.75 | 9.65 | 491 | 194 | |
| S04 | 49.09 | 9.15 | 510 | 211 | |
| S05 | 46.64 | 8.70 | 459 | 174 | |
| S06 | 44.69 | 8.33 | 323 | 137 | |
| S07 | 44.57 | 8.31 | 375 | 149 | |
| S08 | 38.13 | 7.11 | 335 | 133 | |
| S09 | 37.15 | 6.93 | 328 | 125 | |
| S10 | 40.48 | 7.55 | 428 | 194 | |
| S11 | 31.60 | 5.89 | 381 | 139 | |
| S12 | 30.25 | 5.64 | 322 | 130 | |
| Contig | X1059 | 0.02 | 0.004 | 1 | 0 |
| X1121 | 0.01 | 0.003 | 1 | 0 | |
| X1124 | 0.01 | 0.003 | 1 | 0 | |
| X1181 | 0.01 | 0.001 | 1 | 1 | |
| X233 | 0.12 | 0.023 | 1 | 0 | |
| X321 | 0.45 | 0.084 | 1 | 0 | |
| X368 | 0.05 | 0.009 | 1 | 0 | |
| X394_1 | 1.35 | 0.251 | 22 | 18 | |
| X394_2 | 0.94 | 0.175 | 6 | 4 | |
| X394_3 | 0.12 | 0.023 | 2 | 1 | |
| X713 | 0.01 | 0.001 | 1 | 0 | |
| Scaffold | 528.07 | 98.457 | 4,846 | 1,895 | |
| Targeted Contig | 3.10 | 0.578 | 38 | 24 | |
| Not Targeted Contig | 5.17 | 0.964 | —— | —— | |
Targeted scaffolds and unintegrated contigs and their respective size (Mbp), percentage of the genome, number of SNPs targeted, and number of SNPs retained for the final linkage map.
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