Execution times (in seconds) of MFinder, FANMOD and Grochow, all with exhaustive census on the input networks
| Network . | k . | MFinder . | FANMOD . | Grochow . |
|---|---|---|---|---|
| Circuit | 4 | 0.10 | 0.05 | 0.36 |
| 5 | 0.36 | 0.14 | 15.79 | |
| 6 | 2.45 | 0.67 | 2519.3 | |
| 7 | 17.54 | 4.34 | >4h | |
| 8 | 130.66 | 27.46 | >4h | |
| 9 | MEM | 140.66 | >4h | |
| Yeast | 4 | 2.42 | 0.77 | 2.25 |
| 5 | 55.67 | 15.21 | 107.82 | |
| 6 | MEM | 260.38 | >4h | |
| 7 | MEM | 5023.91 | >4h | |
| Social | 4 | 40.44 | 11.22 | 16.98 |
| 5 | MEM | 281.40 | 1122.74 | |
| 6 | MEM | 7951.47 | >4h |
| Network . | k . | MFinder . | FANMOD . | Grochow . |
|---|---|---|---|---|
| Circuit | 4 | 0.10 | 0.05 | 0.36 |
| 5 | 0.36 | 0.14 | 15.79 | |
| 6 | 2.45 | 0.67 | 2519.3 | |
| 7 | 17.54 | 4.34 | >4h | |
| 8 | 130.66 | 27.46 | >4h | |
| 9 | MEM | 140.66 | >4h | |
| Yeast | 4 | 2.42 | 0.77 | 2.25 |
| 5 | 55.67 | 15.21 | 107.82 | |
| 6 | MEM | 260.38 | >4h | |
| 7 | MEM | 5023.91 | >4h | |
| Social | 4 | 40.44 | 11.22 | 16.98 |
| 5 | MEM | 281.40 | 1122.74 | |
| 6 | MEM | 7951.47 | >4h |
Note: Here k indicates the motif size. MEM indicates the out-of-memory situation (Courtesy of Ribeiro et al. [26]).
Execution times (in seconds) of MFinder, FANMOD and Grochow, all with exhaustive census on the input networks
| Network . | k . | MFinder . | FANMOD . | Grochow . |
|---|---|---|---|---|
| Circuit | 4 | 0.10 | 0.05 | 0.36 |
| 5 | 0.36 | 0.14 | 15.79 | |
| 6 | 2.45 | 0.67 | 2519.3 | |
| 7 | 17.54 | 4.34 | >4h | |
| 8 | 130.66 | 27.46 | >4h | |
| 9 | MEM | 140.66 | >4h | |
| Yeast | 4 | 2.42 | 0.77 | 2.25 |
| 5 | 55.67 | 15.21 | 107.82 | |
| 6 | MEM | 260.38 | >4h | |
| 7 | MEM | 5023.91 | >4h | |
| Social | 4 | 40.44 | 11.22 | 16.98 |
| 5 | MEM | 281.40 | 1122.74 | |
| 6 | MEM | 7951.47 | >4h |
| Network . | k . | MFinder . | FANMOD . | Grochow . |
|---|---|---|---|---|
| Circuit | 4 | 0.10 | 0.05 | 0.36 |
| 5 | 0.36 | 0.14 | 15.79 | |
| 6 | 2.45 | 0.67 | 2519.3 | |
| 7 | 17.54 | 4.34 | >4h | |
| 8 | 130.66 | 27.46 | >4h | |
| 9 | MEM | 140.66 | >4h | |
| Yeast | 4 | 2.42 | 0.77 | 2.25 |
| 5 | 55.67 | 15.21 | 107.82 | |
| 6 | MEM | 260.38 | >4h | |
| 7 | MEM | 5023.91 | >4h | |
| Social | 4 | 40.44 | 11.22 | 16.98 |
| 5 | MEM | 281.40 | 1122.74 | |
| 6 | MEM | 7951.47 | >4h |
Note: Here k indicates the motif size. MEM indicates the out-of-memory situation (Courtesy of Ribeiro et al. [26]).
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