The distributions of IL1β and ILRN gene polymorphisms and haplotypes in H. pylori positive and negative patients
. | H. pylori . | χ2 or FE . | p value . | |||
---|---|---|---|---|---|---|
Positive (n = 50) . | Negative (n = 50) . | |||||
No. . | % . | No. . | % . | |||
IL1β-31 genotype | 0.455 | 1.000 | ||||
C/C | 1 | 2.0 | 2 | 4.0 | ||
C/T | 30 | 60.0 | 30 | 60.0 | ||
T/T | 19 | 38.0 | 18 | 36.0 | ||
IL1β-31 allele | 0.090 | 0.764 | ||||
C | 32 | 32.0 | 34 | 34.0 | ||
T | 68 | 68.0 | 66 | 66.0 | ||
IL1β-511 genotype | 19.947* | 0.001* | ||||
C/C | 9 | 18.0 | 19 | 38.0 | ||
C/T | 36 | 72.0 | 14 | 28.0 | ||
T/T | 5 | 10.0 | 17 | 34.0 | ||
IL1β-511 allele | 0.080 | 0.777 | ||||
C | 54 | 54.0 | 52 | 52.0 | ||
T | 46 | 46.0 | 48 | 48.0 | ||
ILRN genotype | 1.052 | 0.811 | ||||
2/2 | 0 | 0.0 | 1 | 2.0 | ||
2/L | 11 | 22.0 | 12 | 24.0 | ||
L/L | 39 | 78.0 | 37 | 74.0 | ||
ILRN allele | 0.411 | 0.521 | ||||
2 | 11 | 11.0 | 14 | 14.0 | ||
L | 89 | 89.0 | 86 | 86.0 | ||
Number of polymorphisms | ||||||
Absent | 8 | 16.0 | 12 | 24.0 | ||
One | 14 | 28.0 | 25 | 50.0 | 10.063* | 0.018* |
Two | 21 | 42.0 | 8 | 16.0 | ||
Three | 7 | 14.0 | 5 | 10.0 | ||
Haplotypes | ||||||
C-C-2 | 8.0 | 6.0 | 0.332 | 0.564 | ||
C-C-L | 20.0 | 15.0 | 1.099 | 0.295 | ||
T-C-2 | 2.0 | 1.0 | 0.344 | 1.000 | ||
T-C-L | 24.0 | 30.0 | 1.449 | 0.229 | ||
C-T-2 | 1.0 | 3.0 | 1.042 | 0.617 | ||
C-T-L | 3.0 | 10.0 | 4.332* | 0.037* | ||
T-T-2 | 0.0 | 4.0 | 4.167 | 0.117 | ||
T-T-L | 42.0 | 31.0 | 6.139* | 0.013* |
. | H. pylori . | χ2 or FE . | p value . | |||
---|---|---|---|---|---|---|
Positive (n = 50) . | Negative (n = 50) . | |||||
No. . | % . | No. . | % . | |||
IL1β-31 genotype | 0.455 | 1.000 | ||||
C/C | 1 | 2.0 | 2 | 4.0 | ||
C/T | 30 | 60.0 | 30 | 60.0 | ||
T/T | 19 | 38.0 | 18 | 36.0 | ||
IL1β-31 allele | 0.090 | 0.764 | ||||
C | 32 | 32.0 | 34 | 34.0 | ||
T | 68 | 68.0 | 66 | 66.0 | ||
IL1β-511 genotype | 19.947* | 0.001* | ||||
C/C | 9 | 18.0 | 19 | 38.0 | ||
C/T | 36 | 72.0 | 14 | 28.0 | ||
T/T | 5 | 10.0 | 17 | 34.0 | ||
IL1β-511 allele | 0.080 | 0.777 | ||||
C | 54 | 54.0 | 52 | 52.0 | ||
T | 46 | 46.0 | 48 | 48.0 | ||
ILRN genotype | 1.052 | 0.811 | ||||
2/2 | 0 | 0.0 | 1 | 2.0 | ||
2/L | 11 | 22.0 | 12 | 24.0 | ||
L/L | 39 | 78.0 | 37 | 74.0 | ||
ILRN allele | 0.411 | 0.521 | ||||
2 | 11 | 11.0 | 14 | 14.0 | ||
L | 89 | 89.0 | 86 | 86.0 | ||
Number of polymorphisms | ||||||
Absent | 8 | 16.0 | 12 | 24.0 | ||
One | 14 | 28.0 | 25 | 50.0 | 10.063* | 0.018* |
Two | 21 | 42.0 | 8 | 16.0 | ||
Three | 7 | 14.0 | 5 | 10.0 | ||
Haplotypes | ||||||
C-C-2 | 8.0 | 6.0 | 0.332 | 0.564 | ||
C-C-L | 20.0 | 15.0 | 1.099 | 0.295 | ||
T-C-2 | 2.0 | 1.0 | 0.344 | 1.000 | ||
T-C-L | 24.0 | 30.0 | 1.449 | 0.229 | ||
C-T-2 | 1.0 | 3.0 | 1.042 | 0.617 | ||
C-T-L | 3.0 | 10.0 | 4.332* | 0.037* | ||
T-T-2 | 0.0 | 4.0 | 4.167 | 0.117 | ||
T-T-L | 42.0 | 31.0 | 6.139* | 0.013* |
Combination of alleles in each haplotype is in the following order: (IL1β-31/IL1β-511/ILRN).
χ2, Chi square test. FE, Fisher exact.
Statistically significant at p ≤ 0.05.
The distributions of IL1β and ILRN gene polymorphisms and haplotypes in H. pylori positive and negative patients
. | H. pylori . | χ2 or FE . | p value . | |||
---|---|---|---|---|---|---|
Positive (n = 50) . | Negative (n = 50) . | |||||
No. . | % . | No. . | % . | |||
IL1β-31 genotype | 0.455 | 1.000 | ||||
C/C | 1 | 2.0 | 2 | 4.0 | ||
C/T | 30 | 60.0 | 30 | 60.0 | ||
T/T | 19 | 38.0 | 18 | 36.0 | ||
IL1β-31 allele | 0.090 | 0.764 | ||||
C | 32 | 32.0 | 34 | 34.0 | ||
T | 68 | 68.0 | 66 | 66.0 | ||
IL1β-511 genotype | 19.947* | 0.001* | ||||
C/C | 9 | 18.0 | 19 | 38.0 | ||
C/T | 36 | 72.0 | 14 | 28.0 | ||
T/T | 5 | 10.0 | 17 | 34.0 | ||
IL1β-511 allele | 0.080 | 0.777 | ||||
C | 54 | 54.0 | 52 | 52.0 | ||
T | 46 | 46.0 | 48 | 48.0 | ||
ILRN genotype | 1.052 | 0.811 | ||||
2/2 | 0 | 0.0 | 1 | 2.0 | ||
2/L | 11 | 22.0 | 12 | 24.0 | ||
L/L | 39 | 78.0 | 37 | 74.0 | ||
ILRN allele | 0.411 | 0.521 | ||||
2 | 11 | 11.0 | 14 | 14.0 | ||
L | 89 | 89.0 | 86 | 86.0 | ||
Number of polymorphisms | ||||||
Absent | 8 | 16.0 | 12 | 24.0 | ||
One | 14 | 28.0 | 25 | 50.0 | 10.063* | 0.018* |
Two | 21 | 42.0 | 8 | 16.0 | ||
Three | 7 | 14.0 | 5 | 10.0 | ||
Haplotypes | ||||||
C-C-2 | 8.0 | 6.0 | 0.332 | 0.564 | ||
C-C-L | 20.0 | 15.0 | 1.099 | 0.295 | ||
T-C-2 | 2.0 | 1.0 | 0.344 | 1.000 | ||
T-C-L | 24.0 | 30.0 | 1.449 | 0.229 | ||
C-T-2 | 1.0 | 3.0 | 1.042 | 0.617 | ||
C-T-L | 3.0 | 10.0 | 4.332* | 0.037* | ||
T-T-2 | 0.0 | 4.0 | 4.167 | 0.117 | ||
T-T-L | 42.0 | 31.0 | 6.139* | 0.013* |
. | H. pylori . | χ2 or FE . | p value . | |||
---|---|---|---|---|---|---|
Positive (n = 50) . | Negative (n = 50) . | |||||
No. . | % . | No. . | % . | |||
IL1β-31 genotype | 0.455 | 1.000 | ||||
C/C | 1 | 2.0 | 2 | 4.0 | ||
C/T | 30 | 60.0 | 30 | 60.0 | ||
T/T | 19 | 38.0 | 18 | 36.0 | ||
IL1β-31 allele | 0.090 | 0.764 | ||||
C | 32 | 32.0 | 34 | 34.0 | ||
T | 68 | 68.0 | 66 | 66.0 | ||
IL1β-511 genotype | 19.947* | 0.001* | ||||
C/C | 9 | 18.0 | 19 | 38.0 | ||
C/T | 36 | 72.0 | 14 | 28.0 | ||
T/T | 5 | 10.0 | 17 | 34.0 | ||
IL1β-511 allele | 0.080 | 0.777 | ||||
C | 54 | 54.0 | 52 | 52.0 | ||
T | 46 | 46.0 | 48 | 48.0 | ||
ILRN genotype | 1.052 | 0.811 | ||||
2/2 | 0 | 0.0 | 1 | 2.0 | ||
2/L | 11 | 22.0 | 12 | 24.0 | ||
L/L | 39 | 78.0 | 37 | 74.0 | ||
ILRN allele | 0.411 | 0.521 | ||||
2 | 11 | 11.0 | 14 | 14.0 | ||
L | 89 | 89.0 | 86 | 86.0 | ||
Number of polymorphisms | ||||||
Absent | 8 | 16.0 | 12 | 24.0 | ||
One | 14 | 28.0 | 25 | 50.0 | 10.063* | 0.018* |
Two | 21 | 42.0 | 8 | 16.0 | ||
Three | 7 | 14.0 | 5 | 10.0 | ||
Haplotypes | ||||||
C-C-2 | 8.0 | 6.0 | 0.332 | 0.564 | ||
C-C-L | 20.0 | 15.0 | 1.099 | 0.295 | ||
T-C-2 | 2.0 | 1.0 | 0.344 | 1.000 | ||
T-C-L | 24.0 | 30.0 | 1.449 | 0.229 | ||
C-T-2 | 1.0 | 3.0 | 1.042 | 0.617 | ||
C-T-L | 3.0 | 10.0 | 4.332* | 0.037* | ||
T-T-2 | 0.0 | 4.0 | 4.167 | 0.117 | ||
T-T-L | 42.0 | 31.0 | 6.139* | 0.013* |
Combination of alleles in each haplotype is in the following order: (IL1β-31/IL1β-511/ILRN).
χ2, Chi square test. FE, Fisher exact.
Statistically significant at p ≤ 0.05.
This PDF is available to Subscribers Only
View Article Abstract & Purchase OptionsFor full access to this pdf, sign in to an existing account, or purchase an annual subscription.