Insertion points (nt, nucleotide) are expressed relative to the ATG initiation codon in the genomic sequences, corresponding to nucleotides 27508321 in SOS1, 24043690 in CIPK24, and 26535878 in CBL4When confirmed by sequencing of the PCR amplicon containing the mutagenic insertion, the actual insertion point is also given; otherwise it is noted as not determined (n.d.). OTL, Oryza Tag Line database; NIAS, National Institute of Agrobiological Sciences, Japan.
Gene . | Source . | Line Code . | Mutagen . | Insertion . | |
---|---|---|---|---|---|
Annotated . | Confirmed . | ||||
SOS1 | NIAS | NC2588 | Tos17 | Intron 5, nt 1228 | Intron 5, nt 1228 |
SOS1 | OTL | AVIB03 | Tos17 | Intron 19, nt 9798 | Intron 19, nt 9802 |
SOS1 | OTL | ARBF06 | Tos17 | Exon 20, nt 9951 | No insertion |
SOS1 | OTL | AKFB09 | Tos17 | Exon 21, nt 11232 | Intron 20, nt 11096 |
SOS1 | OTL | AKFG08 | Tos17 | Exon 21, nt 11312 | Intron 20, nt 11096 |
SOS1 | OTL | AFNB04 | Tos17 | Exon 21, nt 11402 | No insertion |
SOS1 | OTL | AUJE11 | Tos17 | Intron 21, nt 11410 | Intron 21, nt n.d. |
CIPK24 | OTL | AMHC11 | |||
AMHC12 | T-DNA | Exon 1, nt -84 | Exon 1, nt -84 | ||
AMHE12 | |||||
CBL4 | OTL | AJBC12 | T-DNA | 3′-UTR | n.d. |
Gene . | Source . | Line Code . | Mutagen . | Insertion . | |
---|---|---|---|---|---|
Annotated . | Confirmed . | ||||
SOS1 | NIAS | NC2588 | Tos17 | Intron 5, nt 1228 | Intron 5, nt 1228 |
SOS1 | OTL | AVIB03 | Tos17 | Intron 19, nt 9798 | Intron 19, nt 9802 |
SOS1 | OTL | ARBF06 | Tos17 | Exon 20, nt 9951 | No insertion |
SOS1 | OTL | AKFB09 | Tos17 | Exon 21, nt 11232 | Intron 20, nt 11096 |
SOS1 | OTL | AKFG08 | Tos17 | Exon 21, nt 11312 | Intron 20, nt 11096 |
SOS1 | OTL | AFNB04 | Tos17 | Exon 21, nt 11402 | No insertion |
SOS1 | OTL | AUJE11 | Tos17 | Intron 21, nt 11410 | Intron 21, nt n.d. |
CIPK24 | OTL | AMHC11 | |||
AMHC12 | T-DNA | Exon 1, nt -84 | Exon 1, nt -84 | ||
AMHE12 | |||||
CBL4 | OTL | AJBC12 | T-DNA | 3′-UTR | n.d. |
Insertion points (nt, nucleotide) are expressed relative to the ATG initiation codon in the genomic sequences, corresponding to nucleotides 27508321 in SOS1, 24043690 in CIPK24, and 26535878 in CBL4When confirmed by sequencing of the PCR amplicon containing the mutagenic insertion, the actual insertion point is also given; otherwise it is noted as not determined (n.d.). OTL, Oryza Tag Line database; NIAS, National Institute of Agrobiological Sciences, Japan.
Gene . | Source . | Line Code . | Mutagen . | Insertion . | |
---|---|---|---|---|---|
Annotated . | Confirmed . | ||||
SOS1 | NIAS | NC2588 | Tos17 | Intron 5, nt 1228 | Intron 5, nt 1228 |
SOS1 | OTL | AVIB03 | Tos17 | Intron 19, nt 9798 | Intron 19, nt 9802 |
SOS1 | OTL | ARBF06 | Tos17 | Exon 20, nt 9951 | No insertion |
SOS1 | OTL | AKFB09 | Tos17 | Exon 21, nt 11232 | Intron 20, nt 11096 |
SOS1 | OTL | AKFG08 | Tos17 | Exon 21, nt 11312 | Intron 20, nt 11096 |
SOS1 | OTL | AFNB04 | Tos17 | Exon 21, nt 11402 | No insertion |
SOS1 | OTL | AUJE11 | Tos17 | Intron 21, nt 11410 | Intron 21, nt n.d. |
CIPK24 | OTL | AMHC11 | |||
AMHC12 | T-DNA | Exon 1, nt -84 | Exon 1, nt -84 | ||
AMHE12 | |||||
CBL4 | OTL | AJBC12 | T-DNA | 3′-UTR | n.d. |
Gene . | Source . | Line Code . | Mutagen . | Insertion . | |
---|---|---|---|---|---|
Annotated . | Confirmed . | ||||
SOS1 | NIAS | NC2588 | Tos17 | Intron 5, nt 1228 | Intron 5, nt 1228 |
SOS1 | OTL | AVIB03 | Tos17 | Intron 19, nt 9798 | Intron 19, nt 9802 |
SOS1 | OTL | ARBF06 | Tos17 | Exon 20, nt 9951 | No insertion |
SOS1 | OTL | AKFB09 | Tos17 | Exon 21, nt 11232 | Intron 20, nt 11096 |
SOS1 | OTL | AKFG08 | Tos17 | Exon 21, nt 11312 | Intron 20, nt 11096 |
SOS1 | OTL | AFNB04 | Tos17 | Exon 21, nt 11402 | No insertion |
SOS1 | OTL | AUJE11 | Tos17 | Intron 21, nt 11410 | Intron 21, nt n.d. |
CIPK24 | OTL | AMHC11 | |||
AMHC12 | T-DNA | Exon 1, nt -84 | Exon 1, nt -84 | ||
AMHE12 | |||||
CBL4 | OTL | AJBC12 | T-DNA | 3′-UTR | n.d. |
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