. | Gene Sn . | Exon Sn . | . | ||
---|---|---|---|---|---|
Species . | All . | Reliable . | All . | Reliable . | % Reliable genes . |
A. thaliana | 70.2 | 78.8 | 81.5 | 87.9 | 83.5 |
C. elegans | 49.8 | 57.8 | 75.7 | 81.0 | 81.1 |
D. melanogaster | 59.5 | 61.6 | 71.9 | 74.4 | 93.2 |
P. trichocarpa | 69.3 | 76.4 | 86.2 | 90.4 | 84.6 |
M. truncatula | 48.3 | 63.2 | 82.7 | 90.0 | 69.6 |
S. lycopersicum | 40.7 | 68.0 | 78.5 | 92.1 | 54.4 |
B. terrestris | 45.7 | 56.7 | 74.6 | 79.5 | 75.1 |
R. prolixus | 13.2 | 45.5 | 61.4 | 80.2 | 26.4 |
P. tepidariorum | 24.6 | 40.2 | 67.9 | 79.9 | 50.6 |
T. nigroviridis | 10.4 | 67.7 | 60.6 | 89.5 | 11.2 |
D. rerio | 39.1 | 50.3 | 75.6 | 86.3 | 70.8 |
X. tropicalis | 38.9 | 46.3 | 75.3 | 80.0 | 74.8 |
. | Gene Sn . | Exon Sn . | . | ||
---|---|---|---|---|---|
Species . | All . | Reliable . | All . | Reliable . | % Reliable genes . |
A. thaliana | 70.2 | 78.8 | 81.5 | 87.9 | 83.5 |
C. elegans | 49.8 | 57.8 | 75.7 | 81.0 | 81.1 |
D. melanogaster | 59.5 | 61.6 | 71.9 | 74.4 | 93.2 |
P. trichocarpa | 69.3 | 76.4 | 86.2 | 90.4 | 84.6 |
M. truncatula | 48.3 | 63.2 | 82.7 | 90.0 | 69.6 |
S. lycopersicum | 40.7 | 68.0 | 78.5 | 92.1 | 54.4 |
B. terrestris | 45.7 | 56.7 | 74.6 | 79.5 | 75.1 |
R. prolixus | 13.2 | 45.5 | 61.4 | 80.2 | 26.4 |
P. tepidariorum | 24.6 | 40.2 | 67.9 | 79.9 | 50.6 |
T. nigroviridis | 10.4 | 67.7 | 60.6 | 89.5 | 11.2 |
D. rerio | 39.1 | 50.3 | 75.6 | 86.3 | 70.8 |
X. tropicalis | 38.9 | 46.3 | 75.3 | 80.0 | 74.8 |
The test sets were (All) all annotated multi-exon genes and (Reliable) all annotated complete multi-exon genes having all introns supported by mapped RNA-seq reads, the ones sampled by VARUS (36).
. | Gene Sn . | Exon Sn . | . | ||
---|---|---|---|---|---|
Species . | All . | Reliable . | All . | Reliable . | % Reliable genes . |
A. thaliana | 70.2 | 78.8 | 81.5 | 87.9 | 83.5 |
C. elegans | 49.8 | 57.8 | 75.7 | 81.0 | 81.1 |
D. melanogaster | 59.5 | 61.6 | 71.9 | 74.4 | 93.2 |
P. trichocarpa | 69.3 | 76.4 | 86.2 | 90.4 | 84.6 |
M. truncatula | 48.3 | 63.2 | 82.7 | 90.0 | 69.6 |
S. lycopersicum | 40.7 | 68.0 | 78.5 | 92.1 | 54.4 |
B. terrestris | 45.7 | 56.7 | 74.6 | 79.5 | 75.1 |
R. prolixus | 13.2 | 45.5 | 61.4 | 80.2 | 26.4 |
P. tepidariorum | 24.6 | 40.2 | 67.9 | 79.9 | 50.6 |
T. nigroviridis | 10.4 | 67.7 | 60.6 | 89.5 | 11.2 |
D. rerio | 39.1 | 50.3 | 75.6 | 86.3 | 70.8 |
X. tropicalis | 38.9 | 46.3 | 75.3 | 80.0 | 74.8 |
. | Gene Sn . | Exon Sn . | . | ||
---|---|---|---|---|---|
Species . | All . | Reliable . | All . | Reliable . | % Reliable genes . |
A. thaliana | 70.2 | 78.8 | 81.5 | 87.9 | 83.5 |
C. elegans | 49.8 | 57.8 | 75.7 | 81.0 | 81.1 |
D. melanogaster | 59.5 | 61.6 | 71.9 | 74.4 | 93.2 |
P. trichocarpa | 69.3 | 76.4 | 86.2 | 90.4 | 84.6 |
M. truncatula | 48.3 | 63.2 | 82.7 | 90.0 | 69.6 |
S. lycopersicum | 40.7 | 68.0 | 78.5 | 92.1 | 54.4 |
B. terrestris | 45.7 | 56.7 | 74.6 | 79.5 | 75.1 |
R. prolixus | 13.2 | 45.5 | 61.4 | 80.2 | 26.4 |
P. tepidariorum | 24.6 | 40.2 | 67.9 | 79.9 | 50.6 |
T. nigroviridis | 10.4 | 67.7 | 60.6 | 89.5 | 11.2 |
D. rerio | 39.1 | 50.3 | 75.6 | 86.3 | 70.8 |
X. tropicalis | 38.9 | 46.3 | 75.3 | 80.0 | 74.8 |
The test sets were (All) all annotated multi-exon genes and (Reliable) all annotated complete multi-exon genes having all introns supported by mapped RNA-seq reads, the ones sampled by VARUS (36).
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