Number of entries for the main blocks (tables, sections) of the Cyclonet database
| Sections of the Cyclonet database . | Number of Entries . |
|---|---|
| Biological pathways | |
| Compartments: cellular and organism compartments, for example, cytoplasm, liver, blood | 120 |
| Concepts: biological processes, states, functions etc. For example, G1 phase, mitosis | 987 |
| Genes: list of genes involved in regulation of cell cycle and related processes | 156 |
| Proteins | 1942 |
| Reactions | 2406 |
| Relations: list of semantic relations (for example, is-a, part-of, activate) between the pathway components | 6137 |
| RNA | 30 |
| Substances | 485 |
| Diagrams | 179 |
| Models | 37 |
| Microarray data and result of their analysis | |
| Genes: complete list of human genes compiled as union of data from HGNC and UniGene databases | 45 759 |
| Gene crossreferences | 181 949 |
| Clones: list of human cDNA clones used in cDNA microarray experiments. It was compiled from UniGene database | 2 455 666 |
| Information resources: information resources related with microarray data. For example, SMD, GEO, Oncomine | 41 |
| Microarray experiments: categorized list of microarray experiments. Each entry contains brief description of the experiment and links to original article and primary data | 354 |
| Cell cycle | 24 |
| Cancer | 310 |
| Uploaded microarray experiments: number of cDNA experiments which primary data were uploaded into the Cyclonet database | 10 |
| Samples | 223 |
| Observations | 3 407 624 |
| Gene lists (results of analyses of microarray data) | 33 |
| Genes in the lists: total number of genes that were included in these lists. Note—one gene can be included into several lists. | 17 318 |
| Chemoinformatics | |
| Activities: names of molecular mechanisms of action (e.g. Topoisomerase II inhibitor) and pharmacotherapeutic action (e.g. Antimetabolite) | 201 |
| Structures: structural formulas of drug-like molecules interacting with the key elements of the cell cycle | 4205 |
| Targets: molecular targets interacting with chemical compounds mentioned above | 182 |
| Sections of the Cyclonet database . | Number of Entries . |
|---|---|
| Biological pathways | |
| Compartments: cellular and organism compartments, for example, cytoplasm, liver, blood | 120 |
| Concepts: biological processes, states, functions etc. For example, G1 phase, mitosis | 987 |
| Genes: list of genes involved in regulation of cell cycle and related processes | 156 |
| Proteins | 1942 |
| Reactions | 2406 |
| Relations: list of semantic relations (for example, is-a, part-of, activate) between the pathway components | 6137 |
| RNA | 30 |
| Substances | 485 |
| Diagrams | 179 |
| Models | 37 |
| Microarray data and result of their analysis | |
| Genes: complete list of human genes compiled as union of data from HGNC and UniGene databases | 45 759 |
| Gene crossreferences | 181 949 |
| Clones: list of human cDNA clones used in cDNA microarray experiments. It was compiled from UniGene database | 2 455 666 |
| Information resources: information resources related with microarray data. For example, SMD, GEO, Oncomine | 41 |
| Microarray experiments: categorized list of microarray experiments. Each entry contains brief description of the experiment and links to original article and primary data | 354 |
| Cell cycle | 24 |
| Cancer | 310 |
| Uploaded microarray experiments: number of cDNA experiments which primary data were uploaded into the Cyclonet database | 10 |
| Samples | 223 |
| Observations | 3 407 624 |
| Gene lists (results of analyses of microarray data) | 33 |
| Genes in the lists: total number of genes that were included in these lists. Note—one gene can be included into several lists. | 17 318 |
| Chemoinformatics | |
| Activities: names of molecular mechanisms of action (e.g. Topoisomerase II inhibitor) and pharmacotherapeutic action (e.g. Antimetabolite) | 201 |
| Structures: structural formulas of drug-like molecules interacting with the key elements of the cell cycle | 4205 |
| Targets: molecular targets interacting with chemical compounds mentioned above | 182 |
Number of entries for the main blocks (tables, sections) of the Cyclonet database
| Sections of the Cyclonet database . | Number of Entries . |
|---|---|
| Biological pathways | |
| Compartments: cellular and organism compartments, for example, cytoplasm, liver, blood | 120 |
| Concepts: biological processes, states, functions etc. For example, G1 phase, mitosis | 987 |
| Genes: list of genes involved in regulation of cell cycle and related processes | 156 |
| Proteins | 1942 |
| Reactions | 2406 |
| Relations: list of semantic relations (for example, is-a, part-of, activate) between the pathway components | 6137 |
| RNA | 30 |
| Substances | 485 |
| Diagrams | 179 |
| Models | 37 |
| Microarray data and result of their analysis | |
| Genes: complete list of human genes compiled as union of data from HGNC and UniGene databases | 45 759 |
| Gene crossreferences | 181 949 |
| Clones: list of human cDNA clones used in cDNA microarray experiments. It was compiled from UniGene database | 2 455 666 |
| Information resources: information resources related with microarray data. For example, SMD, GEO, Oncomine | 41 |
| Microarray experiments: categorized list of microarray experiments. Each entry contains brief description of the experiment and links to original article and primary data | 354 |
| Cell cycle | 24 |
| Cancer | 310 |
| Uploaded microarray experiments: number of cDNA experiments which primary data were uploaded into the Cyclonet database | 10 |
| Samples | 223 |
| Observations | 3 407 624 |
| Gene lists (results of analyses of microarray data) | 33 |
| Genes in the lists: total number of genes that were included in these lists. Note—one gene can be included into several lists. | 17 318 |
| Chemoinformatics | |
| Activities: names of molecular mechanisms of action (e.g. Topoisomerase II inhibitor) and pharmacotherapeutic action (e.g. Antimetabolite) | 201 |
| Structures: structural formulas of drug-like molecules interacting with the key elements of the cell cycle | 4205 |
| Targets: molecular targets interacting with chemical compounds mentioned above | 182 |
| Sections of the Cyclonet database . | Number of Entries . |
|---|---|
| Biological pathways | |
| Compartments: cellular and organism compartments, for example, cytoplasm, liver, blood | 120 |
| Concepts: biological processes, states, functions etc. For example, G1 phase, mitosis | 987 |
| Genes: list of genes involved in regulation of cell cycle and related processes | 156 |
| Proteins | 1942 |
| Reactions | 2406 |
| Relations: list of semantic relations (for example, is-a, part-of, activate) between the pathway components | 6137 |
| RNA | 30 |
| Substances | 485 |
| Diagrams | 179 |
| Models | 37 |
| Microarray data and result of their analysis | |
| Genes: complete list of human genes compiled as union of data from HGNC and UniGene databases | 45 759 |
| Gene crossreferences | 181 949 |
| Clones: list of human cDNA clones used in cDNA microarray experiments. It was compiled from UniGene database | 2 455 666 |
| Information resources: information resources related with microarray data. For example, SMD, GEO, Oncomine | 41 |
| Microarray experiments: categorized list of microarray experiments. Each entry contains brief description of the experiment and links to original article and primary data | 354 |
| Cell cycle | 24 |
| Cancer | 310 |
| Uploaded microarray experiments: number of cDNA experiments which primary data were uploaded into the Cyclonet database | 10 |
| Samples | 223 |
| Observations | 3 407 624 |
| Gene lists (results of analyses of microarray data) | 33 |
| Genes in the lists: total number of genes that were included in these lists. Note—one gene can be included into several lists. | 17 318 |
| Chemoinformatics | |
| Activities: names of molecular mechanisms of action (e.g. Topoisomerase II inhibitor) and pharmacotherapeutic action (e.g. Antimetabolite) | 201 |
| Structures: structural formulas of drug-like molecules interacting with the key elements of the cell cycle | 4205 |
| Targets: molecular targets interacting with chemical compounds mentioned above | 182 |
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