The identified requirements for the layout of signalling pathway hypergraphs
| Group | Requirement |
| R1. Established requirements described in the literature | a. Edge crossings |
| b. Uniform edge lengths | |
| c. Minimising edge bends | |
| d. Maximising edge crossing angle | |
| e. Symmetry | |
| f. Unit grid alignment | |
| g. Horizontal and vertical edge routing | |
| h. Emphasizing clusters | |
| i. Sub-trees placed outside | |
| j. Low-stress conformations | |
| R2. Specific requirements for signalling hypergraphs | a. Node, edge and label drawing |
| b. Process drawing and ports | |
| c. Submap drawing and terminals | |
| d. Containers and nested layout | |
| e. Cloning | |
| f. Miscellaneous suggested requirements | |
| R3. Novel and underexplored requirements | a. Maintain a global mental map across different layouts |
| b. Layout elements of cycles on a convex scaffold | |
| c. Sacrifice aesthetics for readability |
| Group | Requirement |
| R1. Established requirements described in the literature | a. Edge crossings |
| b. Uniform edge lengths | |
| c. Minimising edge bends | |
| d. Maximising edge crossing angle | |
| e. Symmetry | |
| f. Unit grid alignment | |
| g. Horizontal and vertical edge routing | |
| h. Emphasizing clusters | |
| i. Sub-trees placed outside | |
| j. Low-stress conformations | |
| R2. Specific requirements for signalling hypergraphs | a. Node, edge and label drawing |
| b. Process drawing and ports | |
| c. Submap drawing and terminals | |
| d. Containers and nested layout | |
| e. Cloning | |
| f. Miscellaneous suggested requirements | |
| R3. Novel and underexplored requirements | a. Maintain a global mental map across different layouts |
| b. Layout elements of cycles on a convex scaffold | |
| c. Sacrifice aesthetics for readability |
The identified requirements for the layout of signalling pathway hypergraphs
| Group | Requirement |
| R1. Established requirements described in the literature | a. Edge crossings |
| b. Uniform edge lengths | |
| c. Minimising edge bends | |
| d. Maximising edge crossing angle | |
| e. Symmetry | |
| f. Unit grid alignment | |
| g. Horizontal and vertical edge routing | |
| h. Emphasizing clusters | |
| i. Sub-trees placed outside | |
| j. Low-stress conformations | |
| R2. Specific requirements for signalling hypergraphs | a. Node, edge and label drawing |
| b. Process drawing and ports | |
| c. Submap drawing and terminals | |
| d. Containers and nested layout | |
| e. Cloning | |
| f. Miscellaneous suggested requirements | |
| R3. Novel and underexplored requirements | a. Maintain a global mental map across different layouts |
| b. Layout elements of cycles on a convex scaffold | |
| c. Sacrifice aesthetics for readability |
| Group | Requirement |
| R1. Established requirements described in the literature | a. Edge crossings |
| b. Uniform edge lengths | |
| c. Minimising edge bends | |
| d. Maximising edge crossing angle | |
| e. Symmetry | |
| f. Unit grid alignment | |
| g. Horizontal and vertical edge routing | |
| h. Emphasizing clusters | |
| i. Sub-trees placed outside | |
| j. Low-stress conformations | |
| R2. Specific requirements for signalling hypergraphs | a. Node, edge and label drawing |
| b. Process drawing and ports | |
| c. Submap drawing and terminals | |
| d. Containers and nested layout | |
| e. Cloning | |
| f. Miscellaneous suggested requirements | |
| R3. Novel and underexplored requirements | a. Maintain a global mental map across different layouts |
| b. Layout elements of cycles on a convex scaffold | |
| c. Sacrifice aesthetics for readability |
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