Genome size (1C value) and volume of Illumina HiSeq paired-end (PE) reads analysed and genome proportion (GP) for the three gnetophyte species analysed with RepeatExplorer
Species . | Genome size (Gb) . | No. of paired-end reads analysed for clustering . | Genome sequencing depth . | Read length (bp) . | GenBank accession number . |
---|---|---|---|---|---|
Ephedra altissima | 18.5a | 10 296 111 | 0.05× | 90 | ERR845261/ ERS1497378 |
Gnetum montanum | 4.2b | 2 000 000 | 0.05× | 100 | ERS1497380/ERS1497379 |
Welwitschia mirabilis | 7.2c | 6 960 348 | 0.087× | 90 | ERR845262/ ERS1497381 |
Species . | Genome size (Gb) . | No. of paired-end reads analysed for clustering . | Genome sequencing depth . | Read length (bp) . | GenBank accession number . |
---|---|---|---|---|---|
Ephedra altissima | 18.5a | 10 296 111 | 0.05× | 90 | ERR845261/ ERS1497378 |
Gnetum montanum | 4.2b | 2 000 000 | 0.05× | 100 | ERS1497380/ERS1497379 |
Welwitschia mirabilis | 7.2c | 6 960 348 | 0.087× | 90 | ERR845262/ ERS1497381 |
aData from this study.
bData from Wan et al. (2018).
cData from the Plant DNA C-values Database (Bennett and Leitch, 2012).
Genome size (1C value) and volume of Illumina HiSeq paired-end (PE) reads analysed and genome proportion (GP) for the three gnetophyte species analysed with RepeatExplorer
Species . | Genome size (Gb) . | No. of paired-end reads analysed for clustering . | Genome sequencing depth . | Read length (bp) . | GenBank accession number . |
---|---|---|---|---|---|
Ephedra altissima | 18.5a | 10 296 111 | 0.05× | 90 | ERR845261/ ERS1497378 |
Gnetum montanum | 4.2b | 2 000 000 | 0.05× | 100 | ERS1497380/ERS1497379 |
Welwitschia mirabilis | 7.2c | 6 960 348 | 0.087× | 90 | ERR845262/ ERS1497381 |
Species . | Genome size (Gb) . | No. of paired-end reads analysed for clustering . | Genome sequencing depth . | Read length (bp) . | GenBank accession number . |
---|---|---|---|---|---|
Ephedra altissima | 18.5a | 10 296 111 | 0.05× | 90 | ERR845261/ ERS1497378 |
Gnetum montanum | 4.2b | 2 000 000 | 0.05× | 100 | ERS1497380/ERS1497379 |
Welwitschia mirabilis | 7.2c | 6 960 348 | 0.087× | 90 | ERR845262/ ERS1497381 |
aData from this study.
bData from Wan et al. (2018).
cData from the Plant DNA C-values Database (Bennett and Leitch, 2012).
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