| . | Included . | Studies . | Samples . | m6A Peaks . | Single-base m6A in V2.0 . | . | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Species . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | Total . | AVG. supp1 . | Genome assembly . |
| Homo sapiens | Y | Y | 4 | 13 | 16 | 75 | 2.1E + 5 | 1.3E + 6 | 4.3E + 5 | 14.5 | hg19/hg38 |
| Mus musculus | Y | Y | 2 | 8 | 6 | 52 | 1.4E + 5 | 1.1E + 6 | 5.4E + 5 | 10.7 | mm9/mm10 |
| Sus scrofa | Y | 1 | 3 | 1.3E + 4 | 2.9E + 4 | 2.4 | susScr3 | ||||
| Danio rerio | Y | 1 | 5 | 2.4E + 4 | 3.7E + 4 | 2.8 | danRer10 | ||||
| Drosophila melanogaster | Y | 1 | 2 | 83 | 92 | 1.4 | dm6 | ||||
| Saccharomyces cerevisiae | Y | 1 | 34 | 1.8E + 5 | 6.9E + 4 | 11.4 | R64–1-1 | ||||
| Arabidopsis thaliana | Y | 3 | 14 | 7.9E + 4 | 7.4E + 4 | 3.5 | tair10 | ||||
| Total | 2 | 7 | 5 | 26 | 22 | 185 | 3.5E + 5 | 2.6E + 6 | 1.1E + 6 | ||
| . | Included . | Studies . | Samples . | m6A Peaks . | Single-base m6A in V2.0 . | . | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Species . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | Total . | AVG. supp1 . | Genome assembly . |
| Homo sapiens | Y | Y | 4 | 13 | 16 | 75 | 2.1E + 5 | 1.3E + 6 | 4.3E + 5 | 14.5 | hg19/hg38 |
| Mus musculus | Y | Y | 2 | 8 | 6 | 52 | 1.4E + 5 | 1.1E + 6 | 5.4E + 5 | 10.7 | mm9/mm10 |
| Sus scrofa | Y | 1 | 3 | 1.3E + 4 | 2.9E + 4 | 2.4 | susScr3 | ||||
| Danio rerio | Y | 1 | 5 | 2.4E + 4 | 3.7E + 4 | 2.8 | danRer10 | ||||
| Drosophila melanogaster | Y | 1 | 2 | 83 | 92 | 1.4 | dm6 | ||||
| Saccharomyces cerevisiae | Y | 1 | 34 | 1.8E + 5 | 6.9E + 4 | 11.4 | R64–1-1 | ||||
| Arabidopsis thaliana | Y | 3 | 14 | 7.9E + 4 | 7.4E + 4 | 3.5 | tair10 | ||||
| Total | 2 | 7 | 5 | 26 | 22 | 185 | 3.5E + 5 | 2.6E + 6 | 1.1E + 6 | ||
Comparison of MeRIP-seq data collection and procession results between MeT-DB V1.0 and MeT-DB V2.0.
1AVG. supp (average support number) stands for average number of MeRIP-Seq samples that support each single-based m6A site.
| . | Included . | Studies . | Samples . | m6A Peaks . | Single-base m6A in V2.0 . | . | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Species . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | Total . | AVG. supp1 . | Genome assembly . |
| Homo sapiens | Y | Y | 4 | 13 | 16 | 75 | 2.1E + 5 | 1.3E + 6 | 4.3E + 5 | 14.5 | hg19/hg38 |
| Mus musculus | Y | Y | 2 | 8 | 6 | 52 | 1.4E + 5 | 1.1E + 6 | 5.4E + 5 | 10.7 | mm9/mm10 |
| Sus scrofa | Y | 1 | 3 | 1.3E + 4 | 2.9E + 4 | 2.4 | susScr3 | ||||
| Danio rerio | Y | 1 | 5 | 2.4E + 4 | 3.7E + 4 | 2.8 | danRer10 | ||||
| Drosophila melanogaster | Y | 1 | 2 | 83 | 92 | 1.4 | dm6 | ||||
| Saccharomyces cerevisiae | Y | 1 | 34 | 1.8E + 5 | 6.9E + 4 | 11.4 | R64–1-1 | ||||
| Arabidopsis thaliana | Y | 3 | 14 | 7.9E + 4 | 7.4E + 4 | 3.5 | tair10 | ||||
| Total | 2 | 7 | 5 | 26 | 22 | 185 | 3.5E + 5 | 2.6E + 6 | 1.1E + 6 | ||
| . | Included . | Studies . | Samples . | m6A Peaks . | Single-base m6A in V2.0 . | . | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Species . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | V1.0 . | V2.0 . | Total . | AVG. supp1 . | Genome assembly . |
| Homo sapiens | Y | Y | 4 | 13 | 16 | 75 | 2.1E + 5 | 1.3E + 6 | 4.3E + 5 | 14.5 | hg19/hg38 |
| Mus musculus | Y | Y | 2 | 8 | 6 | 52 | 1.4E + 5 | 1.1E + 6 | 5.4E + 5 | 10.7 | mm9/mm10 |
| Sus scrofa | Y | 1 | 3 | 1.3E + 4 | 2.9E + 4 | 2.4 | susScr3 | ||||
| Danio rerio | Y | 1 | 5 | 2.4E + 4 | 3.7E + 4 | 2.8 | danRer10 | ||||
| Drosophila melanogaster | Y | 1 | 2 | 83 | 92 | 1.4 | dm6 | ||||
| Saccharomyces cerevisiae | Y | 1 | 34 | 1.8E + 5 | 6.9E + 4 | 11.4 | R64–1-1 | ||||
| Arabidopsis thaliana | Y | 3 | 14 | 7.9E + 4 | 7.4E + 4 | 3.5 | tair10 | ||||
| Total | 2 | 7 | 5 | 26 | 22 | 185 | 3.5E + 5 | 2.6E + 6 | 1.1E + 6 | ||
Comparison of MeRIP-seq data collection and procession results between MeT-DB V1.0 and MeT-DB V2.0.
1AVG. supp (average support number) stands for average number of MeRIP-Seq samples that support each single-based m6A site.
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