... for long (up to 25 kb) single-molecule reads. This method circumvents biases intrinsic to amplification-based approaches, enabling thorough analysis of complex genomic regions [including tandem repeats, segmental duplications, ribosomal DNA (rDNA) arrays, and centromeres] as well as direct detection...

... is properly cited. Abstract Runs of homozygosity ( ROHom ) are contiguous stretches of homozygous regions of the genome. In contrast, runs of heterozygosity ( ROHet ) are heterozygosity-rich regions. The detection of these two types of genomic regions (ROHom and ROHet) is influenced by the parameters...

... This article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( https://dbpia.nl.go.kr/journals/pages/open_access/funder_policies/chorus/standard_publication_model ) beef cattle genomic regions tropical cattle PSXI-4 G enome-Wide association...

..., transpositions, inversions, and translocations. Complex genomic regions, those that exhibit unusually high levels of structural variation often in the form multiple copies of particular, high identity sequences generated by some kind of duplicative mechanism, are predominantly affected by this oversight...

... °C) conditions. Genomic regions on chromosome 7, controlling the emergence index and seedling (root and shoot) vigor, were associated with increased chilling tolerance but they did not co-localize with undesirable tannin content quantitative trait loci (QTLs). Shoot and root samples from highly...

... 14 vari SSCsuptrait andthatRFI.- cattle for a terminal production system where bulls will be Keydoi: 10.2527/jam2016-0391Words: genomic regions, RFI, swine mated to mature cows with all resulting progeny harvested. Selection criteria were chosen from expected progeny dif- ferences...

... the Bonferroni correction to adjust for multiple testing. Three genomic regions were significant for the meat quality traits. The PRKAG3 region on chromosome 15 was significant for pH measured from loin and ham and for a* (redness) measured from loin. The smallest P-value in the region...

... under the curve from 0 to 21 DPI. Heritabilities for WG42 and VL were moderate at 0.30 and litter accounted for an additional 14% of phenotypic variation. Genomic regions associated with VL were found on chromosomes 4 and X and on 1, 4, 7, and 17 for WG42. The 1-Mb region identified on chromosome 4...

... ontology terms for genes that contain microsatellites near their transcription start site reveals that regulatory genes involved in growth and development are highly enriched with conserved microsatellites. tandem repeats simple sequence repeats comparative genomics promoters Genomic Regions Enrichment...

.... They concluded that 5^mC deamination rates were highly dependent on local GC content but not on local sequence lengths over which GC content was calculated or the genomic regions where the mutations occurred. Here, we reexamined these statements by using 292,216 CpG→TpG/CpA and GpC→GpT/ApC mutations...

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