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Pollen-microbe interactions in nectar weakly influence bee foraging behavior
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Success C Ekemezie and others
Integrative and Comparative Biology, icaf017, https://doi.org/10.1093/icb/icaf017
Published: 24 April 2025
.../open_access/funder_policies/chorus/standard_publication_model ) Abstract Plant-pollinator interactions are frequently affected by microbes that grow on flowers. Bacteria and yeast commonly grow within floral nectar, which is a sugar-rich floral reward often sought out by pollinators. Nectar is also commonly...
Journal Article
Use of a logging road in a Costa Rican forest changes the composition and stability of soil microbial decomposer communities, and the conversion of organic carbon into biomass
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William D Eaton and others
Journal of Applied Microbiology, Volume 136, Issue 4, April 2025, lxaf075, https://doi.org/10.1093/jambio/lxaf075
Published: 22 March 2025
... fungi soil microbial ecology soil microbes bacteria logging road impacts Pace University Dyson College Office of the Dean Impact Statement As tropical hurricanes are predicted to increase through this century, along with parallel development of logging roads, clarifying how soil microbial...
Journal Article
Metabolism of CO and H2 by pioneer bacteria in volcanic soils and the phyllosphere
Nicola Fantom and others
The ISME Journal, Volume 19, Issue 1, January 2025, wraf053, https://doi.org/10.1093/ismejo/wraf053
Published: 16 March 2025
... of carbon monoxide and hydrogen and discuss how this may contribute to niche colonisation in oligotrophic ecosystems. carbon monoxide hydrogen soil microbes volcano phyllosphere Carbon monoxide (CO) and hydrogen (H2) are indirect greenhouse gases that react with hydroxyl radicals...
Journal Article
Assessing the role of climate and the environment as co-factors for vasculitis diseases
Xavier Rodó and Jordi Anton
in
Rheumatology
Rheumatology, Volume 64, Issue Supplement_1, March 2025, Pages i28–i32, https://doi.org/10.1093/rheumatology/keae671
Published: 12 March 2025
.... Kawasaki disease vasculitis environmental factors wind climate particles aerosols microbes chemistry transient analysis Daniel Bravo Andreu Foundation CEX2023-0001290-S MCIN/AEI/10.13039/501100011033 National R+D+I Plan Instituto de Salud Carlos III 10.13039/501100004587 PI20...
Journal Article
Superior ability of dietary fiber utilization in obese breed pigs linked to gut microbial hydrogenotrophy
Xuan Li and others
ISME Communications, Volume 5, Issue 1, January 2025, ycaf043, https://doi.org/10.1093/ismeco/ycaf043
Published: 09 March 2025
... into the significance of methanogens in intestinal metabolism. National Key Research and Development Program of China 10.13039/501100012166 2022YFD1300402 National Natural Science Foundation of China 10.13039/501100001809 U22A20519 gut microbiome obesity hydrogenotrophic microbes methanogenesis...
Journal Article
PTTM: dissecting the profile of tumor tissue microbiome to reveal microbiota features and associations with host transcriptome
Ruiqian Yao and others
Briefings in Bioinformatics, Volume 26, Issue 1, January 2025, bbaf057, https://doi.org/10.1093/bib/bbaf057
Published: 10 February 2025
... data based on mbodymap, a curated database of microbes from 22 body parts in healthy and diseased individuals [ 18 ]. On the website ( https://mbodymap.microbiome.cloud ), we screened the genus taxid and obtained 1338 genera as a ‘whitelist’. Based on its criteria, we re-examined the samples...
Journal Article
Microbial competition for iron determines its availability to the ferrous wheel
Robert F Strzepek and others
The ISME Journal, Volume 19, Issue 1, January 2025, wraf015, https://doi.org/10.1093/ismejo/wraf015
Published: 27 January 2025
... fuels up to 90% of the productivity in vast oceanic regions. Evidence points to the key role of microbes in mediating this recycling, referred to as the “ferrous wheel”, that remobilises iron initially supplied to ocean biota. In the iron-limited subantarctic waters of the Southern Ocean, iron uptake...
Journal Article
Female oviposition decisions are influenced by the microbial environment
Emily K Fowler and others
Journal of Evolutionary Biology, Volume 38, Issue 3, March 2025, Pages 379–390, https://doi.org/10.1093/jeb/voaf004
Published: 17 January 2025
.... Females reduced egg laying but did not alter egg clustering, on non-sterile substrates that had been naturally colonized with microbes from the environment. However, oviposition remained unaffected when the substrate community consisted of commensal (fly-associated) microbes. The second hypothesis...
Journal Article
Litter quality modulates changes in bacterial and fungal communities during the gut transit of earthworm species of different ecological groups
Huizhen Chao and others
ISME Communications, Volume 5, Issue 1, January 2025, ycae171, https://doi.org/10.1093/ismeco/ycae171
Published: 26 December 2024
... that earthworms primarily influence soil microbiota by mixing and spreading microorganisms from different microhabitats through bioturbation rather than by digesting microorganisms. Graphical Abstract Graphical Abstract earthworm ecological groups gut passage intestinal microbes microbial diversity NGS...
Journal Article
Bilirubin reductase shows host-specific associations in animal large intestines
Keith Dufault-Thompson and others
The ISME Journal, Volume 18, Issue 1, January 2024, wrae242, https://doi.org/10.1093/ismejo/wrae242
Published: 10 December 2024
.... Abstract Animal gastrointestinal tracts contain diverse metabolites, including various host-derived compounds that gut-associated microbes interact with. Here, we explore the diversity and evolution of bilirubin reductase, a bacterial enzyme that metabolizes the host-derived tetrapyrrole bilirubin...
Journal Article
Discovery and adaptation of microbes that degrade oxidized low-density polyethylene films
Amit K Jha and others
Journal of Industrial Microbiology and Biotechnology, Volume 51, 2024, kuae050, https://doi.org/10.1093/jimb/kuae050
Published: 10 December 2024
... polyolefin post-consumer plastics into value-added products while concurrently mitigating adverse environmental effects. These materials contain carbon-based chemicals that can, in principle, serve as the feedstock for microbial metabolism. Some microbes have been reported to grow on polyolefin plastics...
Journal Article
Soil microbial strategies for climate mitigation—report from a climate action workshop in Las Vegas, Nevada, February 2024
Gwyn A Beattie and others
Sustainable Microbiology, Volume 1, Issue 1, January 2024, qvae033, https://doi.org/10.1093/sumbio/qvae033
Published: 05 December 2024
..., and availability of clean water. In this precarious scenario, microbes and plants may provide promising allies for sustaining life on Earth. Thus, it is crucial for policymakers, scientists, NGOs, and the public to recognize the fundamental importance of the soil microbiome. In February 2024, the workshop “Soil...
Journal Article
Metagenomics reveals the genetic diversity between sublineages of UCYN-A and their algal host plastids
Ella Joy H Kantor and others
ISME Communications, Volume 4, Issue 1, January 2024, ycae150, https://doi.org/10.1093/ismeco/ycae150
Published: 04 December 2024
...Ella Joy H Kantor; Brent M Robicheau; Jennifer Tolman; John M Archibald; Julie LaRoche UCYN-A nitroplast plastid metagenomics co-culturing microbes ocean time series pangenome Ocean Frontier Institute’s Ocean Graduate Excellence Network Canada First Research Excellence Fund Ocean...
Journal Article
Trichoderma gets by with a little help from Streptomyces: fungal–bacterial symbiosis in plant growth promotion
Tessa E Reid and Miriam L Gifford
Journal of Experimental Botany, Volume 75, Issue 22, 4 December 2024, Pages 6893–6897, https://doi.org/10.1093/jxb/erae439
Published: 03 December 2024
... Trichoderma afroharzianum T22 induces host transcriptome and endophytic microbiome leading to growth promotion in sorghum. Journal of Experimental Botany 75 , https://doi.org/10.1093/jxb/erae340 . Bioinoculants helper microbes plant growth promotion rhizosphere sorghum sustainable agriculture...
Journal Article
Probiotic model for studying rhizosphere interactions of root exudates and the functional microbiome
Zhiqiang Pang and Peng Xu
The ISME Journal, Volume 18, Issue 1, January 2024, wrae223, https://doi.org/10.1093/ismejo/wrae223
Published: 04 November 2024
... the interactions between common and differential components of metabolites and microbiome. (B) The exudate (mucilage) microenvironment and gatekeeper microbes play crucial roles in maintaining homeostasis, which helps the functional microbiome enrichment and defense against pathogen invasion. (C) Microbial...
Journal Article
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Maintaining Ocean ecosystem health with hydrocarbonoclastic microbes
Wanpeng Wang and others
ISME Communications, ycae135, https://doi.org/10.1093/ismeco/ycae135
Published: 04 November 2024
... hydrocarbonoclastic microorganisms. Strategies for improved biotechnological solutions based on the use of hydrocarbon-degrading microbes are discussed for hydrocarbon remediation in marine water columns, sediments, beaches, and the Arctic. hydrocarbon pollution hydrocarbon remediation hydrocarbon-degrading...
Journal Article
Improving soil health in the UK: why a microbial approach is indispensable in attaining sustainable soils
Daisy Neale and others
Sustainable Microbiology, Volume 1, Issue 1, January 2024, qvae026, https://doi.org/10.1093/sumbio/qvae026
Published: 21 October 2024
..., particularly due to their impacts on soil health. With evidence already showing diminishing returns in productivity, which are only predicted to get worse with the climate crisis, restoring the health of soils and soil-dwelling microbes is an essential prerequisite for a thriving planet. This report proposes...
Journal Article
Biological and experimental factors that define the effectiveness of microbial inoculation on plant traits: a meta-analysis
Hamed Azarbad and Robert R Junker
ISME Communications, Volume 4, Issue 1, January 2024, ycae122, https://doi.org/10.1093/ismeco/ycae122
Published: 14 October 2024
...), and (viii) seeds (seed germination and seed numbers or yield). Microbial sources indicate the setting in which microbes were extracted, including soil, rhizosphere, seed and leaf, root, plant endophytes (not specified), and commercial microbes. © The Author(s) 2024. Published by Oxford University Press...
Journal Article
Empirical evidence of resource dependent evolution of payoff matrices in Saccharomyces cerevisiae populations
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Pavithra Venkataraman and others
Journal of Evolutionary Biology, Volume 38, Issue 1, January 2025, Pages 122–128, https://doi.org/10.1093/jeb/voae128
Published: 10 October 2024
... the need to consider the dynamic nature of payoff matrices while making even short-term predictions about population interactions and dynamics. Graphical Abstract Graphical Abstract evolution payoff matrices game theory microbes yeast public goods Wellcome Trust 10.13039/100010269 IA/S/19/2...
Journal Article
Sensory Dysfunction, Microbial Infections, and Host Responses in Alzheimer's Disease
Praveen Bathini and others
The Journal of Infectious Diseases, Volume 230, Issue Supplement_2, 15 September 2024, Pages S150–S164, https://doi.org/10.1093/infdis/jiae328
Published: 10 September 2024
... ], spirochetes [ 35 ], and C. pneumoniae [ 9 ], have been detected in the olfactory nerve and related limbic structures, probably indicating gateway of the microbes into the brain through these sensory structures. Interestingly, pathogens trigger Aβ deposition, which exerts a protective role...
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