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Authors: Shengwei Hou
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Journal Article

DeepMicroClass sorts metagenomic contigs into prokaryotes, eukaryotes and viruses

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Shengwei Hou and others
NAR Genomics and Bioinformatics, Volume 6, Issue 2, June 2024, lqae044, https://doi.org/10.1093/nargab/lqae044
Published: 06 May 2024
Journal Article

n-Alkane 13C/12C indicates differential metabolic controls of fatty lipid chain extension in C3 and C4 grasses

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Yu Zhao and others
Plant Physiology, Volume 194, Issue 3, March 2024, Pages 1299–1303, https://doi.org/10.1093/plphys/kiad619
Published: 21 November 2023
Journal Article

Identifying local associations in biological time series: algorithms, statistical significance, and applications

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Dongmei Ai and others
Briefings in Bioinformatics, Volume 24, Issue 6, November 2023, bbad390, https://doi.org/10.1093/bib/bbad390
Published: 02 November 2023
Journal Article

Phage–bacterial contig association prediction with a convolutional neural network

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Tianqi Tang and others
Bioinformatics, Volume 38, Issue Supplement_1, July 2022, Pages i45–i52, https://doi.org/10.1093/bioinformatics/btac239
Published: 27 June 2022
Journal Article
EDITOR'S CHOICE

Benchmarking microbial growth rate predictions from metagenomes

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Andrew M Long and others
The ISME Journal, Volume 15, Issue 1, January 2021, Pages 183–195, https://doi.org/10.1038/s41396-020-00773-1
Published: 16 September 2020
Journal Article

Strains of the toxic and bloom-forming Nodularia spumigena (cyanobacteria) can degrade methylphosphonate and release methane

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Jonna E Teikari and others
The ISME Journal, Volume 12, Issue 6, June 2018, Pages 1619–1630, https://doi.org/10.1038/s41396-018-0056-6
Published: 14 February 2018
Journal Article

Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise

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Shengwei Hou and others
The ISME Journal, Volume 12, Issue 4, April 2018, Pages 981–996, https://doi.org/10.1038/s41396-017-0034-4
Published: 15 January 2018