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Authors: Daniel Falush
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Journal Article

Recent mixing of Vibrio parahaemolyticus populations Free

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Chao Yang and others
The ISME Journal, Volume 13, Issue 10, October 2019, Pages 2578–2588, https://doi.org/10.1038/s41396-019-0461-5
Published: 24 June 2019
Journal Article

RADpainter and fineRADstructure: Population Inference from RADseq Data Open Access

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Milan Malinsky and others
Molecular Biology and Evolution, Volume 35, Issue 5, May 2018, Pages 1284–1290, https://doi.org/10.1093/molbev/msy023
Published: 20 February 2018
Journal Article

The Landscape of Realized Homologous Recombination in Pathogenic Bacteria Open Access

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Koji Yahara and others
Molecular Biology and Evolution, Volume 33, Issue 2, February 2016, Pages 456–471, https://doi.org/10.1093/molbev/msv237
Published: 29 October 2015
Journal Article

Roary: rapid large-scale prokaryote pan genome analysis Open Access

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Andrew J. Page and others
Bioinformatics, Volume 31, Issue 22, November 2015, Pages 3691–3693, https://doi.org/10.1093/bioinformatics/btv421
Published: 20 July 2015
Journal Article

Epidemic Clones, Oceanic Gene Pools, and Eco-LD in the Free Living Marine Pathogen Vibrio parahaemolyticus Open Access

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Yujun Cui and others
Molecular Biology and Evolution, Volume 32, Issue 6, June 2015, Pages 1396–1410, https://doi.org/10.1093/molbev/msv009
Published: 19 January 2015
Journal Article

A Bayesian Approach to Inferring the Phylogenetic Structure of Communities from Metagenomic Data Free

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John D O’Brien and others
Genetics, Volume 197, Issue 3, 1 July 2014, Pages 925–937, https://doi.org/10.1534/genetics.114.161299
Published: 01 July 2014
Journal Article

Efficient Inference of Recombination Hot Regions in Bacterial Genomes Open Access

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Koji Yahara and others
Molecular Biology and Evolution, Volume 31, Issue 6, June 2014, Pages 1593–1605, https://doi.org/10.1093/molbev/msu082
Published: 27 February 2014
Journal Article

Inference of Homologous Recombination in Bacteria Using Whole-Genome Sequences Free

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Xavier Didelot and others
Genetics, Volume 186, Issue 4, 1 December 2010, Pages 1435–1449, https://doi.org/10.1534/genetics.110.120121
Published: 01 December 2010
Journal Article

Campylobacter Genotyping to Determine the Source of Human Infection Get access

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Samuel K. Sheppard and others
Clinical Infectious Diseases, Volume 48, Issue 8, 15 April 2009, Pages 1072–1078, https://doi.org/10.1086/597402
Published: 15 April 2009
Journal Article

SimMLST: simulation of multi-locus sequence typing data under a neutral model Free

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Xavier Didelot and others
Bioinformatics, Volume 25, Issue 11, June 2009, Pages 1442–1444, https://doi.org/10.1093/bioinformatics/btp145
Published: 13 March 2009
Journal Article

Inference of Bacterial Microevolution Using Multilocus Sequence Data Get access

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Xavier Didelot and Daniel Falush
Genetics, Volume 175, Issue 3, 1 March 2007, Pages 1251–1266, https://doi.org/10.1534/genetics.106.063305
Published: 01 March 2007
Journal Article

Inference of Population Structure Using Multilocus Genotype Data: Linked Loci and Correlated Allele Frequencies Get access

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Daniel Falush and others
Genetics, Volume 164, Issue 4, 1 August 2003, Pages 1567–1587, https://doi.org/10.1093/genetics/164.4.1567
Published: 01 August 2003