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Hsiao-Chi Chen, Malcolm McDonald, Srinidhi Varadharajan, Debosmita Sardar, Stephen C Mack, Benjamin Deneen, EPEN-05. TRANSCRIPTIONAL FACTOR-DIRECTED EPIGENETIC REGULATION IN CANCER NEUROSCIENCE OF ZFTA-RELA EPENDYMOMA, Neuro-Oncology, Volume 25, Issue Supplement_1, June 2023, Page i27, https://doi.org/10.1093/neuonc/noad073.109
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Abstract
ZFTA-RELA (ZRFUS) ependymoma is a pediatric brain tumor with dismal 10-year progression free survival rates. Prior studies revealed low somatic mutation load in pediatric ependymoma compared to adult glioma, suggesting that developmental mechanisms play a key role during disease development. Using human tissues and mouse tumors generated from our autochthonous in utero electroporation (IUE) model, we identified a cohort of developmental transcription factors (TFs) linked to ZRFUS by investigating histone serotonylation changes with other epigenetic datasets. We further performed in vivo barcode-screening and identified the ETS variant transcription factor 5 (ETV5) is sufficient and required for disease progression. To further reveal the disease mechanism driven by ETV5, we applied transcriptomic, epigenetic, and proteomic analyses, and found ETV5 suppresses neuropeptide Y (NPY) expression in mouse ZRFUS tumors by binding with epigenetic modulator, chromobox 3 (CBX3). We further found NPY overexpression delays tumor progression and suppressed tumor-driven neuronal activity in mice. This study suggests developmental TF can shape tumor-promoting microenvironment during disease progression through epigenetic regulation.
- transcription, genetic
- cancer
- ependymoma
- adult
- disease progression
- electroporation
- glioma
- histones
- neuropeptide y
- neuroscience
- mice
- neoplasms
- transcription factor
- brain tumor, childhood
- mutation, somatic
- epigenetics
- protein overexpression
- ependymoma, pediatric
- tumor progression
- bar codes
- progression-free survival
- datasets