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Marta Padovan, Marta Maccari, Alberto Bosio, Salvatore Vizzaccaro, Ilaria Cestonaro, Martina Corrà, Mario Caccese, Giulia Cerretti, Matteo Fassan, Vittorina Zagonel, Giuseppe Lombardi, BIOM-19. NEXT-GENERATION SEQUENCING (NGS) FOR IDENTIFYING ACTIONABLE MOLECULAR ALTERATIONS IN NEWLY DIAGNOSED AND RECURRENT IDHWT-GLIOBLASTOMA (GBM) PATIENTS: A LARGE MONO INSTITUTIONAL EXPERIENCE, Neuro-Oncology, Volume 24, Issue Supplement_7, November 2022, Page vii8, https://doi.org/10.1093/neuonc/noac209.029
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Abstract
panels allow the identification of alterations within hundreds of cancer-related genes and can guide a personalized strategy in glioma treatment.
From Nov 2019 to Jan 2022 at Veneto Institute of Oncology, Padua, Italy, a large cohort of IDHwt-GBM tissues was analyzed by NGS (FoundationOne®CDx). We identified all potential actionable molecular alterations at diagnosis and/or at recurrence. High tumor mutational burden (TMB) was defined as ≥10 mutations/megabase.
We analyzed 429 IDHwt-GBM samples: NGS profile was available for 419 samples (97.7%); sample failures in 10 cases (2.3%). 351 (84%) and 68 (16%) GBM samples derived from surgery at diagnosis and recurrence, respectively. All patients received radiotherapy and/or temozolomide as first line therapy. Among all the analyzed samples, the most frequent actionable molecular alterations were: CDKN2A (57%), CDKN2B (53%), EGFR amplification (39%), EGFR mutation (24%), PTEN loss (27%), RB1 (23%), NF1 (18%), PIK3CA (18%), CDK4 (15%), MDM2 (10%), PDGFRA (8%), BRCA1-2 (7%), FGFR1-3 (7%), Myc (6%), JAK (6%), ROS1 (5%), METmut (2%), METampl (2%), BRAF V600E (2%). No NTRK1/2/3 druggable alterations were observed. High TMB was found in 18 samples. The incidence of alteration of EGFR (ampl/mut), RB1, PIK3CA was statistically different between the two subgroups of newly diagnosed and recurrent GBM samples (Fisher test). To date, 10% of patients received a personalized treatment as compassionate use, off-label use or in clinical trials (9 Dabrafenib/Trametinib, 8 Alpelisib, 3 Erdafitinib, 2 Ipatasertib, 1 Alectinib, 1 Capmatinib, 1 Palbociclib, 1 Entrectinib, 1 Pamiparib). Activity analysis is still ongoing.
is feasible in GBM samples. Potentially, a high rate of patients could receive a personalized treatment. The activity analysis is ongoing. However, the incidence of actionable molecular alterations may differ between diagnosis and recurrent GBM samples.
- radiation therapy
- mutation
- cancer
- glioblastoma
- brca1 protein
- genes
- brca1 gene
- genes, p16
- glioma
- infectious mononucleosis
- italy
- medical oncology
- protein p16
- epidermal growth factor receptors
- platelet-derived growth factor alpha receptor
- receptor, trka
- surgical procedures, operative
- diagnosis
- surgery specialty
- temozolomide
- pten gene
- braf gene
- ros protein
- pik3ca gene
- off-label use
- amplification
- cdkn2b gene
- compassionate use
- massively-parallel genome sequencing
- trametinib
- dabrafenib
- palbociclib
- cyclin-dependent kinase 4
- alectinib
- egfr gene mutation
- alpelisib
- erdafitinib
- entrectinib
- capmatinib
- tumor mutation burden