
Cover image

Volume 225, Issue 8, 15 April 2022
EDITORIAL COMMENTARY
Lung Function After Coronavirus Disease 2019: Some Answers, More Questions
MAJOR ARTICLES AND BRIEF REPORTS
COVID-2019
Lung Function Decline in Relation to COVID-19 in the General Population: A Matched Cohort Study With Prepandemic Assessment of Lung Function
In nonhospitalized individuals, COVID-19–related decline of lung function was small but measurable and comparable to published minimal clinically important differences for FEV1and FVC.
Impact of COVID-19 on Tuberculosis Prevention and Treatment in Canada: A Multicenter Analysis of 10 833 Patients
Human Research Study of Particulate Propagation Distance From Human Respiratory Function
This human research study quantifies the effect of face coverings on the reduction of droplet and aerosol emission from human respiratory function. Speech and cough scenarios were tested to recommend safe social distance in the context of pandemics like COVID-19.
HIV/AIDS
Human Immunodeficiency Virus (HIV) Genetic Diversity Informs Stage of HIV-1 Infection Among Patients Receiving Antiretroviral Therapy in Botswana
A single HIV virus is usually transmitted. HIV then replicates, making errors, and over time genetic diversity increases. We found that time since HIV infection can be estimated from within-patient HIV genetic diversity, even when patients are on treatment.
Clonal Hematopoiesis Is Associated With Low CD4 Nadir and Increased Residual HIV Transcriptional Activity in Virally Suppressed Individuals With HIV
The prevalence of clonal hematopoiesis mutations adjusted for age was increased and clone size was larger in people with HIV compared to uninfected controls. These mutations were associated with low CD4 nadir, increased residual HIV-1 transcriptional activity, and coagulation factors.
Incidence of Cardiometabolic Diseases in People With and Without Human Immunodeficiency Virus in the United Kingdom: A Population-Based Matched Cohort Study
Comparing people with HIV (PWH) to matched people without HIV over a 20-year follow up, we report an increased risk for composite cardiovascular disease, stroke, ischemic heart disease, hypertension, type 2 diabetes, chronic kidney disease, and all-cause mortality for PWH.
VIRUSES
A Randomized Phase 1/2 Study of a Respiratory Syncytial Virus Prefusion F Vaccine
Respiratory syncytial virus stabilized prefusion F subunit vaccine (RSVpreF) formulations were well tolerated and highly immunogenic in younger adults. These findings support further development of RSVpreF in a pivotal phase 3 study for maternal immunization.
Exportation of Monkeypox Virus From the African Continent
Molecular and epidemiological data from multiple human monkeypox exportations from Nigeria show no direct linkage between travelers; however, limited genetic variation among sequenced viruses point to a possible common source pool or independently acquired infections within a small geographic area.
Characterizing Environmental Surveillance Sites in Nigeria and Their Sensitivity to Detect Poliovirus and Other Enteroviruses
Easily measured environmental surveillance site characteristics, including sewage properties recorded with a water-quality probe, predict site sensitivity to detect poliovirus and other enteroviruses. Data collection during site selection could identify better sites and improve the sensitivity of global poliovirus surveillance.
Influenza Vaccine Effectiveness by A(H3N2) Phylogenetic Subcluster and Prior Vaccination History: 2016–2017 and 2017–2018 Epidemics in Canada
During 2016–2017 and 2017–2018 influenza A(H3N2) epidemics, updated clade 3C.2a vaccine bore egg-adaptation mutations and circulating 3C.2a viruses showed substantial genetic diversity. Vaccine effectiveness by phylogenetic subcluster and prior vaccination history reveal informative heterogeneity underpinning subtype-specific findings.
A Randomized Dose-Escalating Phase I Trial of a Replication-Deficient Lymphocytic Choriomeningitis Virus Vector-Based Vaccine Against Human Cytomegalovirus
We described the first-in-man study of a replication-deficient arenavirus-based vector, HB-101, expressing cytomegalovirus gB and pp65. Consecutive administrations of HB-101 were well tolerated and elicited gB-binding and neutralizing antibodies as well as cytomegalovirus-specific CD8 T-cell responses in healthy volunteers.
PARASITES
High Prevalence of Plasmodium falciparum K13 Mutations in Rwanda Is Associated With Slow Parasite Clearance After Treatment With Artemether-Lumefantrine
A phase 2 clinical study was conducted in Mali, Gabon, Ghana, Uganda, and Rwanda. Patients with malaria were randomized to artemether-lumefantrine or cipargamin. Here we report an allele frequency of 22% for R561H in Rwanda and associated delayed parasite clearance.
Evaluating the Impact of Programmatic Mass Drug Administration for Malaria in Zambia Using Routine Incidence Data
This study evaluated 1 year of programmatic mass drug administration (pMDA) on malaria incidence in southern Zambia and found that areas where pMDA was conducted saw a 46% greater decrease in incidence at the time of intervention than comparison areas.
Association of Reduced Long-Lasting Insecticidal Net Efficacy and Pyrethroid Insecticide Resistance With Overexpression of CYP6P4, CYP6P3, and CYP6Z1 in Populations of Anopheles coluzzii From Southeast Côte d’Ivoire
Intense insecticide resistance is compromising malaria vector control in Côte d’Ivoire, driven principally by metabolic resistance mechanisms. Study findings support the urgent deployment of interventions incorporating newly approved insecticides and synergists to interrupt malaria transmission by insecticide-resistant vector populations.
Screening of a Library of Recombinant Schistosoma mansoni Proteins With Sera From Murine and Human Controlled Infections Identifies Early Serological Markers
A library of recombinant S mansoni cell-surface and secreted proteins was produced in mammalian cells for functional and epidemiological studies. Using human and mouse sera from experimentally controlled infections, we identified molecular markers of infection as early as 5 weeks.
BACTERIA
Insights Into Pneumococcal Pneumonia Using Lung Aspirates and Nasopharyngeal Swabs Collected From Pneumonia Patients in The Gambia
We investigated the pathogenesis of pneumococcal pneumonia using clinical samples. Results demonstrated that pneumococci in the lung originated from the nasopharynx and suggested that changes in pneumococcal gene expression in the lung are a feature of pneumococcal pneumonia.
Benefits of Aerosolized Phages for the Treatment of Pneumonia Due to Methicillin-Resistant Staphylococcus aureus: An Experimental Study in Rats
Nebulized bacteriophages (aerophages) showed promise for the treatment of pneumonia due to MRSA; aerophages reduced bacterial loads and lung damage, and when combined with systemically applied phages, they rescued >90% of animals from lethal infection.
Vaccination With Detoxified Leukocidin AB Reduces Bacterial Load in a Staphylococcus aureus Minipig Deep Surgical Wound Infection Model
We developed a robust and translational minipig deep surgical wound infection model to better predict the efficacy of Staphylococcus aureus vaccines in human clinical trials. Leucocidin AB was shown to have potential as a vaccine antigen against S. aureus.
PATHOGENESIS AND HOST RESPONSE
Differential gene expression, irrespective of circulating Hepatitis B Surface Antigen levels, between Inactive Carrier and Nucleos(t)ide Analogue-Treated Hepatitis B Virus patients
Cell-Mediated Immune Responses After Administration of the Live or the Recombinant Zoster Vaccine: 5-Year Persistence
Association of Host Factors With Antibody Response to Seasonal Influenza Vaccination in Allogeneic Hematopoietic Stem Cell Transplant Patients
Patients after hematopoietic stem cell transplantation show a highly heterogeneous antibody response to seasonal influenza vaccination that can be partially explained by easily accessible clinical data such as the type of immunosuppressive treatment, absolute lymphocyte count, and donor relationship.