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Volume 18, Issue 1, January 2024
Comments
Protist predation selects for the soil resistome
The ISME Journal, Volume 18, Issue 1, January 2024, wrad007, https://doi.org/10.1093/ismejo/wrad007
Bacterial type VI secretion system helps prevent cheating in microbial communities
The ISME Journal, Volume 18, Issue 1, January 2024, wrae003, https://doi.org/10.1093/ismejo/wrae003
Comment on “Humic acid-dependent respiratory growth of Methanosarcina acetivorans involves pyrroloquinoline quinone” by Yuanxu Song et al.
The ISME Journal, Volume 18, Issue 1, January 2024, wrae020, https://doi.org/10.1093/ismejo/wrae020
Response to comment on “Humic acid-dependent respiratory growth of Methanosarcina acetivorans involves pyrroloquinoline quinone” by Yuanxu Song et al.
The ISME Journal, Volume 18, Issue 1, January 2024, wrae019, https://doi.org/10.1093/ismejo/wrae019
Nonparametric richness estimators Chao1 and ACE must not be used with amplicon sequence variant data
The ISME Journal, Volume 18, Issue 1, January 2024, wrae106, https://doi.org/10.1093/ismejo/wrae106
Microbial solutions must be deployed against climate catastrophe
The ISME Journal, Volume 18, Issue 1, January 2024, wrae219, https://doi.org/10.1093/ismejo/wrae219
Perspective
Community assembly of root-colonizing arbuscular mycorrhizal fungi: beyond carbon and into defence?
The ISME Journal, Volume 18, Issue 1, January 2024, wrae007, https://doi.org/10.1093/ismejo/wrae007
Proton-pumping rhodopsins promote the growth and survival of phytoplankton in a highly variable ocean
The ISME Journal, Volume 18, Issue 1, January 2024, wrae079, https://doi.org/10.1093/ismejo/wrae079
The atmosphere: a transport medium or an active microbial ecosystem?
The ISME Journal, Volume 18, Issue 1, January 2024, wrae092, https://doi.org/10.1093/ismejo/wrae092
SeqCode in the golden age of prokaryotic systematics
The ISME Journal, Volume 18, Issue 1, January 2024, wrae109, https://doi.org/10.1093/ismejo/wrae109
Diversity alone does not reliably indicate the healthiness of an animal microbiome
The ISME Journal, Volume 18, Issue 1, January 2024, wrae133, https://doi.org/10.1093/ismejo/wrae133
Leveraging genomic information to predict environmental preferences of bacteria
The ISME Journal, Volume 18, Issue 1, January 2024, wrae195, https://doi.org/10.1093/ismejo/wrae195
Probiotic model for studying rhizosphere interactions of root exudates and the functional microbiome
The ISME Journal, Volume 18, Issue 1, January 2024, wrae223, https://doi.org/10.1093/ismejo/wrae223
Winogradsky Reviews
Biocontrol in built environments to reduce pathogen exposure and infection risk
The ISME Journal, Volume 18, Issue 1, January 2024, wrad024, https://doi.org/10.1093/ismejo/wrad024
Megataxonomy and global ecology of the virosphere
The ISME Journal, Volume 18, Issue 1, January 2024, wrad042, https://doi.org/10.1093/ismejo/wrad042
Investigating eco-evolutionary processes of microbial community assembly in the wild using a model leaf litter system
The ISME Journal, Volume 18, Issue 1, January 2024, wrae043, https://doi.org/10.1093/ismejo/wrae043
Microbiome science of human excrement composting
The ISME Journal, Volume 18, Issue 1, January 2024, wrae228, https://doi.org/10.1093/ismejo/wrae228
Review Articles
Enigmatic persistence of aerobic methanotrophs in oxygen-limiting freshwater habitats
The ISME Journal, Volume 18, Issue 1, January 2024, wrae041, https://doi.org/10.1093/ismejo/wrae041
Strategies for tailoring functional microbial synthetic communities
The ISME Journal, Volume 18, Issue 1, January 2024, wrae049, https://doi.org/10.1093/ismejo/wrae049
Dryland microbiomes reveal community adaptations to desertification and climate change
The ISME Journal, Volume 18, Issue 1, January 2024, wrae056, https://doi.org/10.1093/ismejo/wrae056
Mechanisms and implications of bacterial–fungal competition for soil resources
The ISME Journal, Volume 18, Issue 1, January 2024, wrae073, https://doi.org/10.1093/ismejo/wrae073
Microbial ecology of the deep terrestrial subsurface
The ISME Journal, Volume 18, Issue 1, January 2024, wrae091, https://doi.org/10.1093/ismejo/wrae091
Leveraging genome-scale metabolic models to understand aerobic methanotrophs
The ISME Journal, Volume 18, Issue 1, January 2024, wrae102, https://doi.org/10.1093/ismejo/wrae102
Cellular interactions and evolutionary origins of endosymbiotic relationships with ciliates
The ISME Journal, Volume 18, Issue 1, January 2024, wrae117, https://doi.org/10.1093/ismejo/wrae117
Phylogenetic reconciliation: making the most of genomes to understand microbial ecology and evolution
The ISME Journal, Volume 18, Issue 1, January 2024, wrae129, https://doi.org/10.1093/ismejo/wrae129
Integrated overview of stramenopile ecology, taxonomy, and heterotrophic origin
The ISME Journal, Volume 18, Issue 1, January 2024, wrae150, https://doi.org/10.1093/ismejo/wrae150
Drivers and consequences of microbial community coalescence
The ISME Journal, Volume 18, Issue 1, January 2024, wrae179, https://doi.org/10.1093/ismejo/wrae179
Temporal enrichment of comammox Nitrospira and Ca. Nitrosocosmicus in a coastal plastisphere
The ISME Journal, Volume 18, Issue 1, January 2024, wrae186, https://doi.org/10.1093/ismejo/wrae186
Biotics and bacterial function: impact on gut and host health
The ISME Journal, Volume 18, Issue 1, January 2024, wrae226, https://doi.org/10.1093/ismejo/wrae226
Aminolipids in bacterial membranes and the natural environment
The ISME Journal, Volume 18, Issue 1, January 2024, wrae229, https://doi.org/10.1093/ismejo/wrae229
Brief Communications
Tissue-associated and vertically transmitted bacterial symbiont in the coral Pocillopora acuta
The ISME Journal, Volume 18, Issue 1, January 2024, wrad027, https://doi.org/10.1093/ismejo/wrad027
Genome reduction occurred in early Prochlorococcus with an unusually low effective population size
The ISME Journal, Volume 18, Issue 1, January 2024, wrad035, https://doi.org/10.1093/ismejo/wrad035
Pleomorphic viruses establish stable relationship with marine hyperthermophilic archaea
The ISME Journal, Volume 18, Issue 1, January 2024, wrae008, https://doi.org/10.1093/ismejo/wrae008
Transglobal spread of an ecologically relevant sea urchin parasite
The ISME Journal, Volume 18, Issue 1, January 2024, wrae024, https://doi.org/10.1093/ismejo/wrae024
Isolation of a widespread giant virus implicated in cryptophyte bloom collapse
The ISME Journal, Volume 18, Issue 1, January 2024, wrae029, https://doi.org/10.1093/ismejo/wrae029
Phylogenomic position of eupelagonemids, abundant, and diverse deep-ocean heterotrophs
The ISME Journal, Volume 18, Issue 1, January 2024, wrae040, https://doi.org/10.1093/ismejo/wrae040
Bridging ecological assembly process and community stability upon bacterial invasions
The ISME Journal, Volume 18, Issue 1, January 2024, wrae066, https://doi.org/10.1093/ismejo/wrae066
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
The ISME Journal, Volume 18, Issue 1, January 2024, wrae076, https://doi.org/10.1093/ismejo/wrae076
Lytic and temperate phage naturally coexist in a dynamic population model
The ISME Journal, Volume 18, Issue 1, January 2024, wrae093, https://doi.org/10.1093/ismejo/wrae093
Divergent marine anaerobic ciliates harbor closely related Methanocorpusculum endosymbionts
The ISME Journal, Volume 18, Issue 1, January 2024, wrae125, https://doi.org/10.1093/ismejo/wrae125
Hidden syndinian and perkinsid infections in dinoflagellate hosts revealed by single-cell transcriptomics
The ISME Journal, Volume 18, Issue 1, January 2024, wrae188, https://doi.org/10.1093/ismejo/wrae188
Chemolithoautotrophic bacteria flourish at dark water–ice interfaces of an emerged Arctic cold seep
The ISME Journal, Volume 18, Issue 1, January 2024, wrae170, https://doi.org/10.1093/ismejo/wrae170
Trophic modulation of endophytes by rhizosphere protists
The ISME Journal, Volume 18, Issue 1, January 2024, wrae235, https://doi.org/10.1093/ismejo/wrae235
Sulfur-oxidizing symbionts colonize the digestive tract of their lucinid hosts
The ISME Journal, Volume 18, Issue 1, January 2024, wrae200, https://doi.org/10.1093/ismejo/wrae200
Weak selection for resistance to quorum sensing inhibition during multiple host infection cycles
The ISME Journal, Volume 18, Issue 1, January 2024, wrae251, https://doi.org/10.1093/ismejo/wrae251
Original Articles
Competition for iron shapes metabolic antagonism between Bacillus subtilis and Pseudomonas marginalis
The ISME Journal, Volume 18, Issue 1, January 2024, wrad001, https://doi.org/10.1093/ismejo/wrad001
Novel order-level lineage of ammonia-oxidizing archaea widespread in marine and terrestrial environments
The ISME Journal, Volume 18, Issue 1, January 2024, wrad002, https://doi.org/10.1093/ismejo/wrad002
Anaerobic hexadecane degradation by a thermophilic Hadarchaeon from Guaymas Basin
The ISME Journal, Volume 18, Issue 1, January 2024, wrad004, https://doi.org/10.1093/ismejo/wrad004
Taxonomic and functional stability overrules seasonality in polar benthic microbiomes
The ISME Journal, Volume 18, Issue 1, January 2024, wrad005, https://doi.org/10.1093/ismejo/wrad005
Tradeoffs between phage resistance and nitrogen fixation drive the evolution of genes essential for cyanobacterial heterocyst functionality
The ISME Journal, Volume 18, Issue 1, January 2024, wrad008, https://doi.org/10.1093/ismejo/wrad008
Gut microbiota reflect adaptation of cave-dwelling tadpoles to resource scarcity
The ISME Journal, Volume 18, Issue 1, January 2024, wrad009, https://doi.org/10.1093/ismejo/wrad009
Direct observations of microbial community succession on sinking marine particles
The ISME Journal, Volume 18, Issue 1, January 2024, wrad010, https://doi.org/10.1093/ismejo/wrad010
Nitrate-driven anaerobic oxidation of ethane and butane by bacteria
The ISME Journal, Volume 18, Issue 1, January 2024, wrad011, https://doi.org/10.1093/ismejo/wrad011
Plankton community changes during the last 124 000 years in the subarctic Bering Sea derived from sedimentary ancient DNA
The ISME Journal, Volume 18, Issue 1, January 2024, wrad006, https://doi.org/10.1093/ismejo/wrad006
Low-level resource partitioning supports coexistence among functionally redundant bacteria during successional dynamics
The ISME Journal, Volume 18, Issue 1, January 2024, wrad013, https://doi.org/10.1093/ismejo/wrad013
Unexpected carbon utilization activity of sulfate-reducing microorganisms in temperate and permanently cold marine sediments
The ISME Journal, Volume 18, Issue 1, January 2024, wrad014, https://doi.org/10.1093/ismejo/wrad014
Distinct microbial hydrogen and reductant disposal pathways explain interbreed variations in ruminant methane yield
The ISME Journal, Volume 18, Issue 1, January 2024, wrad016, https://doi.org/10.1093/ismejo/wrad016
Microbial metabolism influences microplastic perturbation of dissolved organic matter in agricultural soils
The ISME Journal, Volume 18, Issue 1, January 2024, wrad017, https://doi.org/10.1093/ismejo/wrad017
Rhizoviticin is an alphaproteobacterial tailocin that mediates biocontrol of grapevine crown gall disease
The ISME Journal, Volume 18, Issue 1, January 2024, wrad003, https://doi.org/10.1093/ismejo/wrad003
Specialized digestive mechanism for an insect-bacterium gut symbiosis
The ISME Journal, Volume 18, Issue 1, January 2024, wrad021, https://doi.org/10.1093/ismejo/wrad021
Dynamic nitrogen fixation in an aerobic endophyte of Populus
The ISME Journal, Volume 18, Issue 1, January 2024, wrad012, https://doi.org/10.1093/ismejo/wrad012
Temporal colonization and metabolic regulation of the gut microbiome in neonatal oxen at single nucleotide resolution
The ISME Journal, Volume 18, Issue 1, January 2024, wrad022, https://doi.org/10.1093/ismejo/wrad022
Predominant heterotrophic diazotrophic bacteria are involved in Sargassum proliferation in the Great Atlantic Sargassum Belt
The ISME Journal, Volume 18, Issue 1, January 2024, wrad026, https://doi.org/10.1093/ismejo/wrad026
Trojan horselike T6SS effector TepC mediates both interference competition and exploitative competition
The ISME Journal, Volume 18, Issue 1, January 2024, wrad028, https://doi.org/10.1093/ismejo/wrad028
Temperature, pH, and oxygen availability contributed to the functional differentiation of ancient Nitrososphaeria
The ISME Journal, Volume 18, Issue 1, January 2024, wrad031, https://doi.org/10.1093/ismejo/wrad031
Cryptochrome PtCPF1 regulates high temperature acclimation of marine diatoms through coordination of iron and phosphorus uptake
The ISME Journal, Volume 18, Issue 1, January 2024, wrad019, https://doi.org/10.1093/ismejo/wrad019
Genomic basis of environmental adaptation in the widespread poly-extremophilic Exiguobacterium group
The ISME Journal, Volume 18, Issue 1, January 2024, wrad020, https://doi.org/10.1093/ismejo/wrad020
Filamentous prophage Pf4 promotes genetic exchange in Pseudomonas aeruginosa
The ISME Journal, Volume 18, Issue 1, January 2024, wrad025, https://doi.org/10.1093/ismejo/wrad025
Microbial communities are crucial ecological entities with complex interactions, among which metabolites and genetic exchange can dictate community composition and stability. Previous studies have focused on metabolites excreted by one cell and used by another. Here, we demonstrate that the Pf4 prophage is frequently exchanged among P. aeruginosa cells, enabling the effective repair of Pf4-defective cells. Given that P. aeruginosa cells build better biofilms and gain increased virulence and antibiotic resistance at the cost of producing phage particles, Pf4 trafficking might effectively prevent potential cheating behaviors and ensure cost-sharing within the population.
High compositional and functional similarity in the microbiome of deep-sea sponges
The ISME Journal, Volume 18, Issue 1, January 2024, wrad030, https://doi.org/10.1093/ismejo/wrad030
Bacteria use a catabolic patchwork pathway of apparently recent origin for degradation of the synthetic buffer compound TRIS
The ISME Journal, Volume 18, Issue 1, January 2024, wrad023, https://doi.org/10.1093/ismejo/wrad023
Flexible genomic island conservation across freshwater and marine Methylophilaceae
The ISME Journal, Volume 18, Issue 1, January 2024, wrad036, https://doi.org/10.1093/ismejo/wrad036
Interspecific competition prevents the proliferation of social cheaters in an unstructured environment
The ISME Journal, Volume 18, Issue 1, January 2024, wrad038, https://doi.org/10.1093/ismejo/wrad038
Microorganisms oxidize glucose through distinct pathways in permeable and cohesive sediments
The ISME Journal, Volume 18, Issue 1, January 2024, wrae001, https://doi.org/10.1093/ismejo/wrae001
Ecological niches and assembly dynamics of diverse microbial consortia in the gastrointestine of goat kids
The ISME Journal, Volume 18, Issue 1, January 2024, wrae002, https://doi.org/10.1093/ismejo/wrae002
Members of the class Candidatus Ordosarchaeia imply an alternative evolutionary scenario from methanogens to haloarchaea
The ISME Journal, Volume 18, Issue 1, January 2024, wrad033, https://doi.org/10.1093/ismejo/wrad033
Episymbiotic Saccharibacteria induce intracellular lipid droplet production in their host bacteria
The ISME Journal, Volume 18, Issue 1, January 2024, wrad034, https://doi.org/10.1093/ismejo/wrad034
Characterizing core microbiota and regulatory functions of the pig gut microbiome
The ISME Journal, Volume 18, Issue 1, January 2024, wrad037, https://doi.org/10.1093/ismejo/wrad037
CRISPR-Cas in Pseudomonas aeruginosa provides transient population-level immunity against high phage exposures
The ISME Journal, Volume 18, Issue 1, January 2024, wrad039, https://doi.org/10.1093/ismejo/wrad039
Strain-level diversity in sulfonamide biodegradation: adaptation of Paenarthrobacter to sulfonamides
The ISME Journal, Volume 18, Issue 1, January 2024, wrad040, https://doi.org/10.1093/ismejo/wrad040
Spatial organization of a soil cyanobacterium and its cyanosphere through GABA/Glu signaling to optimize mutualistic nitrogen fixation
The ISME Journal, Volume 18, Issue 1, January 2024, wrad029, https://doi.org/10.1093/ismejo/wrad029
Inter-plasmid transfer of antibiotic resistance genes accelerates antibiotic resistance in bacterial pathogens
The ISME Journal, Volume 18, Issue 1, January 2024, wrad032, https://doi.org/10.1093/ismejo/wrad032
Proximity-based defensive mutualism between Streptomyces and Mesorhizobium by sharing and sequestering iron
The ISME Journal, Volume 18, Issue 1, January 2024, wrad041, https://doi.org/10.1093/ismejo/wrad041
Declines in ice cover are accompanied by light limitation responses and community change in freshwater diatoms
The ISME Journal, Volume 18, Issue 1, January 2024, wrad015, https://doi.org/10.1093/ismejo/wrad015
Rice receptor kinase FLR7 regulates rhizosphere oxygen levels and enriches the dominant Anaeromyxobacter that improves submergence tolerance in rice
The ISME Journal, Volume 18, Issue 1, January 2024, wrae006, https://doi.org/10.1093/ismejo/wrae006
Global biogeography and ecological implications of cobamide-producing prokaryotes
The ISME Journal, Volume 18, Issue 1, January 2024, wrae009, https://doi.org/10.1093/ismejo/wrae009
Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages
The ISME Journal, Volume 18, Issue 1, January 2024, wrae005, https://doi.org/10.1093/ismejo/wrae005
Microbial eukaryotic predation pressure and biomass at deep-sea hydrothermal vents
The ISME Journal, Volume 18, Issue 1, January 2024, wrae004, https://doi.org/10.1093/ismejo/wrae004
Climate acts as an environmental filter to plant pathogens
The ISME Journal, Volume 18, Issue 1, January 2024, wrae010, https://doi.org/10.1093/ismejo/wrae010
Interspecific interactions facilitate keystone species in a multispecies biofilm that promotes plant growth
The ISME Journal, Volume 18, Issue 1, January 2024, wrae012, https://doi.org/10.1093/ismejo/wrae012
The Constructive Black Queen hypothesis: new functions can evolve under conditions favouring gene loss
The ISME Journal, Volume 18, Issue 1, January 2024, wrae011, https://doi.org/10.1093/ismejo/wrae011
Biotic interactions between benthic infauna and aerobic methanotrophs mediate methane fluxes from coastal sediments
The ISME Journal, Volume 18, Issue 1, January 2024, wrae013, https://doi.org/10.1093/ismejo/wrae013
Dynamics of carbon substrate competition among heterotrophic microorganisms
The ISME Journal, Volume 18, Issue 1, January 2024, wrae018, https://doi.org/10.1093/ismejo/wrae018
Protozoan predation enhances stress resistance and antibiotic tolerance in Burkholderia cenocepacia by triggering the SOS response
The ISME Journal, Volume 18, Issue 1, January 2024, wrae014, https://doi.org/10.1093/ismejo/wrae014
Impact of airborne algicidal bacteria on marine phytoplankton blooms
The ISME Journal, Volume 18, Issue 1, January 2024, wrae016, https://doi.org/10.1093/ismejo/wrae016
Commensal protist Tritrichomonas musculus exhibits a dynamic life cycle that induces extensive remodeling of the gut microbiota
The ISME Journal, Volume 18, Issue 1, January 2024, wrae023, https://doi.org/10.1093/ismejo/wrae023
Methylotrophic methanogenesis in the Archaeoglobi revealed by cultivation of Ca. Methanoglobus hypatiae from a Yellowstone hot spring
The ISME Journal, Volume 18, Issue 1, January 2024, wrae026, https://doi.org/10.1093/ismejo/wrae026
VapC10 toxin of the legume symbiont Sinorhizobium meliloti targets tRNASer and controls intracellular lifestyle
The ISME Journal, Volume 18, Issue 1, January 2024, wrae015, https://doi.org/10.1093/ismejo/wrae015
Coral mucus as a reservoir of bacteriophages targeting Vibrio pathogens
The ISME Journal, Volume 18, Issue 1, January 2024, wrae017, https://doi.org/10.1093/ismejo/wrae017
Selection of photosynthetic traits by turbulent mixing governs formation of cyanobacterial blooms in shallow eutrophic lakes
The ISME Journal, Volume 18, Issue 1, January 2024, wrae021, https://doi.org/10.1093/ismejo/wrae021
Stronger compensatory thermal adaptation of soil microbial respiration with higher substrate availability
The ISME Journal, Volume 18, Issue 1, January 2024, wrae025, https://doi.org/10.1093/ismejo/wrae025
Entomopathogenic pseudomonads can share an insect host with entomopathogenic nematodes and their mutualistic bacteria
The ISME Journal, Volume 18, Issue 1, January 2024, wrae028, https://doi.org/10.1093/ismejo/wrae028
Nitrous oxide inhibition of methanogenesis represents an underappreciated greenhouse gas emission feedback
The ISME Journal, Volume 18, Issue 1, January 2024, wrae027, https://doi.org/10.1093/ismejo/wrae027
Coordinated transcriptional response to environmental stress by a Synechococcus virus
The ISME Journal, Volume 18, Issue 1, January 2024, wrae032, https://doi.org/10.1093/ismejo/wrae032
Bacterial adenine cross-feeding stems from a purine salvage bottleneck
The ISME Journal, Volume 18, Issue 1, January 2024, wrae034, https://doi.org/10.1093/ismejo/wrae034
Adaptive evolution of plasmid and chromosome contributes to the fitness of a blaNDM-bearing cointegrate plasmid in Escherichia coli
The ISME Journal, Volume 18, Issue 1, January 2024, wrae037, https://doi.org/10.1093/ismejo/wrae037
Gut microbiota facilitate adaptation of invasive moths to new host plants
The ISME Journal, Volume 18, Issue 1, January 2024, wrae031, https://doi.org/10.1093/ismejo/wrae031
High niche specificity and host genetic diversity of groundwater viruses
The ISME Journal, Volume 18, Issue 1, January 2024, wrae035, https://doi.org/10.1093/ismejo/wrae035
In vivo evolution of antimicrobial resistance in a biofilm model of Pseudomonas aeruginosa lung infection
The ISME Journal, Volume 18, Issue 1, January 2024, wrae036, https://doi.org/10.1093/ismejo/wrae036
Cell-to-cell heterogeneity drives host–virus coexistence in a bloom-forming alga
The ISME Journal, Volume 18, Issue 1, January 2024, wrae038, https://doi.org/10.1093/ismejo/wrae038
SLC24A-mediated calcium exchange as an indispensable component of the diatom cell density-driven signaling pathway
The ISME Journal, Volume 18, Issue 1, January 2024, wrae039, https://doi.org/10.1093/ismejo/wrae039
Soil microbiome feedbacks during disturbance-driven forest ecosystem conversion
The ISME Journal, Volume 18, Issue 1, January 2024, wrae047, https://doi.org/10.1093/ismejo/wrae047
Niche differentiation in microbial communities with stable genomic traits over time in engineered systems
The ISME Journal, Volume 18, Issue 1, January 2024, wrae042, https://doi.org/10.1093/ismejo/wrae042
Staphylococcus epidermidis bacteriocin A37 kills natural competitors with a unique mechanism of action
The ISME Journal, Volume 18, Issue 1, January 2024, wrae044, https://doi.org/10.1093/ismejo/wrae044
Proteome trait regulation of marine Synechococcus elemental stoichiometry under global change
The ISME Journal, Volume 18, Issue 1, January 2024, wrae046, https://doi.org/10.1093/ismejo/wrae046
Pollutant profile complexity governs wastewater removal of recalcitrant pharmaceuticals
The ISME Journal, Volume 18, Issue 1, January 2024, wrae033, https://doi.org/10.1093/ismejo/wrae033
Scallop-bacteria symbiosis from the deep sea reveals strong genomic coupling in the absence of cellular integration
The ISME Journal, Volume 18, Issue 1, January 2024, wrae048, https://doi.org/10.1093/ismejo/wrae048
Gut microbiota contribute to variations in honey bee foraging intensity
The ISME Journal, Volume 18, Issue 1, January 2024, wrae030, https://doi.org/10.1093/ismejo/wrae030
Chronic bee paralysis virus exploits host antimicrobial peptides and alters gut microbiota composition to facilitate viral infection
The ISME Journal, Volume 18, Issue 1, January 2024, wrae051, https://doi.org/10.1093/ismejo/wrae051
Endosymbiont Tremblaya phenacola influences the reproduction of cotton mealybugs by regulating the mechanistic target of rapamycin pathway
The ISME Journal, Volume 18, Issue 1, January 2024, wrae052, https://doi.org/10.1093/ismejo/wrae052
Role of Type VI secretion system in pathogenic remodeling of host gut microbiota during Aeromonas veronii infection
The ISME Journal, Volume 18, Issue 1, January 2024, wrae053, https://doi.org/10.1093/ismejo/wrae053
Hypervirulent Klebsiella pneumoniae employs genomic island encoded toxins against bacterial competitors in the gut
The ISME Journal, Volume 18, Issue 1, January 2024, wrae054, https://doi.org/10.1093/ismejo/wrae054
Enzymatic machinery of wood-inhabiting fungi that degrade temperate tree species
The ISME Journal, Volume 18, Issue 1, January 2024, wrae050, https://doi.org/10.1093/ismejo/wrae050
Soil redox status governs within-field spatial variation in microbial arsenic methylation and rice straighthead disease
The ISME Journal, Volume 18, Issue 1, January 2024, wrae057, https://doi.org/10.1093/ismejo/wrae057
Single-cell genomics of a bloom-forming phytoplankton species reveals population genetic structure across continents
The ISME Journal, Volume 18, Issue 1, January 2024, wrae045, https://doi.org/10.1093/ismejo/wrae045
Surface-active antibiotic production as a multifunctional adaptation for postfire microorganisms
The ISME Journal, Volume 18, Issue 1, January 2024, wrae022, https://doi.org/10.1093/ismejo/wrae022
Lactic acid bacteria modulate the CncC pathway to enhance resistance to β-cypermethrin in the oriental fruit fly
The ISME Journal, Volume 18, Issue 1, January 2024, wrae058, https://doi.org/10.1093/ismejo/wrae058
Iron limitation of heterotrophic bacteria in the California Current System tracks relative availability of organic carbon and iron
The ISME Journal, Volume 18, Issue 1, January 2024, wrae061, https://doi.org/10.1093/ismejo/wrae061
Prevalence of trace gas-oxidizing soil bacteria increases with radial distance from Polloquere hot spring within a high-elevation Andean cold desert
The ISME Journal, Volume 18, Issue 1, January 2024, wrae062, https://doi.org/10.1093/ismejo/wrae062
Anaerobic oxidation of ammonium and short-chain gaseous alkanes coupled to nitrate reduction by a bacterial consortium
The ISME Journal, Volume 18, Issue 1, January 2024, wrae063, https://doi.org/10.1093/ismejo/wrae063
Linking methanotroph phenotypes to genotypes using a simple spatially resolved model ecosystem
The ISME Journal, Volume 18, Issue 1, January 2024, wrae060, https://doi.org/10.1093/ismejo/wrae060
Depletion of protective microbiota promotes the incidence of fruit disease
The ISME Journal, Volume 18, Issue 1, January 2024, wrae071, https://doi.org/10.1093/ismejo/wrae071
Massive genome reduction predates the divergence of Symbiodiniaceae dinoflagellates
The ISME Journal, Volume 18, Issue 1, January 2024, wrae059, https://doi.org/10.1093/ismejo/wrae059
Secondary messenger signalling influences Pseudomonas aeruginosa adaptation to sinus and lung environments
The ISME Journal, Volume 18, Issue 1, January 2024, wrae065, https://doi.org/10.1093/ismejo/wrae065
Ecological relevance of flagellar motility in soil bacterial communities
The ISME Journal, Volume 18, Issue 1, January 2024, wrae067, https://doi.org/10.1093/ismejo/wrae067
Antibiotic dose and nutrient availability differentially drive the evolution of antibiotic resistance and persistence
The ISME Journal, Volume 18, Issue 1, January 2024, wrae070, https://doi.org/10.1093/ismejo/wrae070
Rhizobium determinants of rhizosphere persistence and root colonization
The ISME Journal, Volume 18, Issue 1, January 2024, wrae072, https://doi.org/10.1093/ismejo/wrae072
Deazaflavin metabolite produced by endosymbiotic bacteria controls fungal host reproduction
The ISME Journal, Volume 18, Issue 1, January 2024, wrae074, https://doi.org/10.1093/ismejo/wrae074
Emergent antibiotic persistence in a spatially structured synthetic microbial mutualism
The ISME Journal, Volume 18, Issue 1, January 2024, wrae075, https://doi.org/10.1093/ismejo/wrae075
Microorganisms in subarctic soils are depleted of ribosomes under short-, medium-, and long-term warming
The ISME Journal, Volume 18, Issue 1, January 2024, wrae081, https://doi.org/10.1093/ismejo/wrae081
Microbiome processing of organic nitrogen input supports growth and cyanotoxin production of Microcystis aeruginosa cultures
The ISME Journal, Volume 18, Issue 1, January 2024, wrae082, https://doi.org/10.1093/ismejo/wrae082
Macroalgal virosphere assists with host–microbiome equilibrium regulation and affects prokaryotes in surrounding marine environments
The ISME Journal, Volume 18, Issue 1, January 2024, wrae083, https://doi.org/10.1093/ismejo/wrae083
Diurnal transcriptional variation is reduced in a nitrogen-fixing diatom endosymbiont
The ISME Journal, Volume 18, Issue 1, January 2024, wrae064, https://doi.org/10.1093/ismejo/wrae064
Enantioselective transformation of phytoplankton-derived dihydroxypropanesulfonate by marine bacteria
The ISME Journal, Volume 18, Issue 1, January 2024, wrae084, https://doi.org/10.1093/ismejo/wrae084
Active prophages in coral-associated Halomonas capable of lateral transduction
The ISME Journal, Volume 18, Issue 1, January 2024, wrae085, https://doi.org/10.1093/ismejo/wrae085
Metabolic potential of Nitrososphaera-associated clades
The ISME Journal, Volume 18, Issue 1, January 2024, wrae086, https://doi.org/10.1093/ismejo/wrae086
Antibiotic-altered gut microbiota explain host memory plasticity and disrupt pace-of-life covariation for an aquatic snail
The ISME Journal, Volume 18, Issue 1, January 2024, wrae078, https://doi.org/10.1093/ismejo/wrae078
Environment-specific virocell metabolic reprogramming
The ISME Journal, Volume 18, Issue 1, January 2024, wrae055, https://doi.org/10.1093/ismejo/wrae055
Warming effects on grassland soil microbial communities are amplified in cool months
The ISME Journal, Volume 18, Issue 1, January 2024, wrae088, https://doi.org/10.1093/ismejo/wrae088
Metabolite cross-feeding enables concomitant catabolism of chlorinated methanes and chlorinated ethenes in synthetic microbial assemblies
The ISME Journal, Volume 18, Issue 1, January 2024, wrae090, https://doi.org/10.1093/ismejo/wrae090
Symbiotic bacteria and fungi proliferate in diapause and may enhance overwintering survival in a solitary bee
The ISME Journal, Volume 18, Issue 1, January 2024, wrae089, https://doi.org/10.1093/ismejo/wrae089
