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Volume 12, Issue 2, February 2018
Commentary
Uncultivated microbes—in need of their own nomenclature?
Aharon Oren and George M Garrity
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 309–311, https://doi.org/10.1038/ismej.2017.188
Perspective
Build your own soil: exploring microfluidics to create microbial habitat structures
Kristin Aleklett and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 312–319, https://doi.org/10.1038/ismej.2017.184
Original Article
Function-related replacement of bacterial siderophore pathways
Hilke Bruns and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 320–329, https://doi.org/10.1038/ismej.2017.137
Acetoclastic Methanosaeta are dominant methanogens in organic-rich Antarctic marine sediments
Stephanie A Carr and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 330–342, https://doi.org/10.1038/ismej.2017.150
Cyanophage-encoded lipid desaturases: oceanic distribution, diversity and function
Sheila Roitman and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 343–355, https://doi.org/10.1038/ismej.2017.159
Individual-level trait diversity predicts phytoplankton community properties better than species richness or evenness
Simone Fontana and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 356–366, https://doi.org/10.1038/ismej.2017.160
Bacteria alone establish the chemical basis of the wood-fall chemosynthetic ecosystem in the deep-sea
Dimitri Kalenitchenko and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 367–379, https://doi.org/10.1038/ismej.2017.163
Mycorrhizal fungi show regular community compositions in natural ecosystems
Erik Verbruggen and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 380–385, https://doi.org/10.1038/ismej.2017.169
Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline
Sandra Denman and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 386–399, https://doi.org/10.1038/ismej.2017.170
The plant circadian clock influences rhizosphere community structure and function
Charley J Hubbard and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 400–410, https://doi.org/10.1038/ismej.2017.172
Metabolic shift at the class level sheds light on adaptation of methanogens to oxidative environments
Zhe Lyu and Yahai Lu
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 411–423, https://doi.org/10.1038/ismej.2017.173
Characterization of ecologically diverse viruses infecting co-occurring strains of cosmopolitan hyperhalophilic Bacteroidetes
Judith Villamor and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 424–437, https://doi.org/10.1038/ismej.2017.175
Bacterial secretion of D-arginine controls environmental microbial biodiversity
Laura Alvarez and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 438–450, https://doi.org/10.1038/ismej.2017.176
Soil microbial diversity drives the priming effect along climate gradients: a case study in Madagascar
Kanto Razanamalala and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 451–462, https://doi.org/10.1038/ismej.2017.178
Clonal expansion behind a marine diatom bloom
Maria Valeria Ruggiero and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 463–472, https://doi.org/10.1038/ismej.2017.181
Degradation of hydrogen peroxide at the ocean’s surface: the influence of the microbial community on the realized thermal niche of Prochlorococcus
Lanying Ma and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 473–484, https://doi.org/10.1038/ismej.2017.182
Contrasting the relative importance of species sorting and dispersal limitation in shaping marine bacterial versus protist communities
Wenxue Wu and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 485–494, https://doi.org/10.1038/ismej.2017.183
Electron carriers in microbial sulfate reduction inferred from experimental and environmental sulfur isotope fractionations
Christine B Wenk and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 495–507, https://doi.org/10.1038/ismej.2017.185
Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations
Wei Qin and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 508–519, https://doi.org/10.1038/ismej.2017.186
The impact of elevated CO2 on Prochlorococcus and microbial interactions with ‘helper’ bacterium Alteromonas
Gwenn M M Hennon and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 520–531, https://doi.org/10.1038/ismej.2017.189
Phage mobility is a core determinant of phage–bacteria coexistence in biofilms
Emilia L Simmons and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 532–543, https://doi.org/10.1038/ismej.2017.190
Changes in bacterioplankton community structure during early lake ontogeny resulting from the retreat of the Greenland Ice Sheet
Hannes Peter and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 544–555, https://doi.org/10.1038/ismej.2017.191
In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina
Lars Behrendt and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 556–567, https://doi.org/10.1038/ismej.2017.192
Cyanobacterial photosynthesis under sulfidic conditions: insights from the isolate Leptolyngbya sp. strain hensonii
Trinity L Hamilton and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 568–584, https://doi.org/10.1038/ismej.2017.193
Immune loss as a driver of coexistence during host-phage coevolution
J L Weissman and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 585–597, https://doi.org/10.1038/ismej.2017.194
What intrinsic and extrinsic factors explain the stoichiometric diversity of aquatic heterotrophic bacteria?
Casey M Godwin and James B Cotner
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 598–609, https://doi.org/10.1038/ismej.2017.195
Specific substrate-driven changes in human faecal microbiota composition contrast with functional redundancy in short-chain fatty acid production
Nicole Reichardt and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 610–622, https://doi.org/10.1038/ismej.2017.196
Microbial life on a sand grain: from bulk sediment to single grains
David Probandt and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 623–633, https://doi.org/10.1038/ismej.2017.197
Short Communication
Soil protist communities form a dynamic hub in the soil microbiome
Wu Xiong and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 634–638, https://doi.org/10.1038/ismej.2017.171
Recent expansion of heat-activated retrotransposons in the coral symbiont Symbiodinium microadriaticum
Jit Ern Chen and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 639–643, https://doi.org/10.1038/ismej.2017.179
Dispersal timing determines the importance of priority effects in bacterial communities
Pavel Svoboda and others
The ISME Journal, Volume 12, Issue 2, February 2018, Pages 644–646, https://doi.org/10.1038/ismej.2017.180
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