
Volume 16, Issue 12
December 2024
Cover image
Cover image

MATEdb2 is a repository of high-quality proteomes of animals made available to speed up phylogenomic studies. In the image, we depict this repository as a library, with books being the animal proteomes of the different animal phyla and outgroups. The stained glass window displays a simplified version of part of the animal tree of life, which we hope our database can help illuminate in future research https://doi.org/10.1093/gbe/evae235
EISSN 1759-6653
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Volume 16, Issue 12, December 2024
Special Section: De Novo Gene Evolution
Article
Expression of Random Sequences and de novo Evolved Genes From the Mouse in Human Cells Reveals Functional Diversity and Specificity
Silvia Aldrovandi and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae175, https://doi.org/10.1093/gbe/evae175
Letter
Transcriptome and Evolutionary Analysis of Pseudotrichomonas keilini, a Free-Living Anaerobic Eukaryote
Hend Abu-Elmakarem and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae262, https://doi.org/10.1093/gbe/evae262
Articles
Transcriptomic Sexual Conflict at Two Evolutionary Timescales Revealed by Experimental Evolution in Caenorhabditis elegans
Katja R Kasimatis and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae256, https://doi.org/10.1093/gbe/evae256
TIdeS: A Comprehensive Framework for Accurate Open Reading Frame Identification and Classification in Eukaryotic Transcriptomes
Xyrus X Maurer-Alcalá and Eunsoo Kim
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae252, https://doi.org/10.1093/gbe/evae252
Chromosome-scale Reference Genome and RAD-based Genetic Map of Yellow Starthistle (Centaurea solstitialis) Reveal Putative Structural Variation and QTL Associated With Invader Traits
Bryan Reatini and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae243, https://doi.org/10.1093/gbe/evae243
Adaptation During the Shift from Entomopathogen to Endosymbiont Is Accompanied by Gene Loss and Intensified Selection
Chris M Ward and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae251, https://doi.org/10.1093/gbe/evae251
Convergent Evolution Associated with the Loss of Developmental Diapause May Promote Extended Lifespan in Bees
Priscila K F Santos and Karen M Kapheim
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae255, https://doi.org/10.1093/gbe/evae255
Coevolution and Adaptation of Transition Nuclear Proteins and Protamines in Naturally Ascrotal Mammals Support the Black Queen Hypothesis
Simin Chai and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae260, https://doi.org/10.1093/gbe/evae260
Selfing Shapes Fixation of a Mutant Allele Under Flux Equilibrium
Yu Xiao and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae261, https://doi.org/10.1093/gbe/evae261
Complex Genomic Landscape of Inversion Polymorphism in Europe's Most Destructive Forest Pest
Anastasiia Mykhailenko and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae263, https://doi.org/10.1093/gbe/evae263
Paralogous Gene Recruitment in Multiple Families Constitutes Genetic Architecture and Robustness of Pod Dehiscence in Legumes
Bin Yong and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae267, https://doi.org/10.1093/gbe/evae267
Multiple Displacement Amplification Facilitates SMRT Sequencing of Microscopic Animals and the Genome of the Gastrotrich Lepidodermella squamata (Dujardin 1841)
Nickellaus G Roberts and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae254, https://doi.org/10.1093/gbe/evae254
Neo-Sex Chromosome Evolution in Treehoppers Despite Long-Term X Chromosome Conservation
Daniela H Palmer Droguett and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae264, https://doi.org/10.1093/gbe/evae264
Evidence for a Novel X Chromosome in Termites
Roxanne Fraser and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae265, https://doi.org/10.1093/gbe/evae265
Genome Streamlining: Effect of Mutation Rate and Population Size on Genome Size Reduction
Juliette Luiselli and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae250, https://doi.org/10.1093/gbe/evae250
Molecular Basis of Eusocial Complexity: The Case of Worker Reproductivity in Bees
David C Prince and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae269, https://doi.org/10.1093/gbe/evae269
Exploring the Allelic Diversity of the Self-Incompatibility Gene Across Natural Populations in Petunia (Solanaceae)
Taiga Maenosono and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae270, https://doi.org/10.1093/gbe/evae270
Genome Resources
De Novo Long-Read Genome Assembly and Annotation of the Mosquito Gut-Dwelling Fungus, Smittium minutisporum
Anusha Prakash and Yan Wang
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae259, https://doi.org/10.1093/gbe/evae259
De Novo Genome Assembly and Annotation for the Synanthropic Webbing Clothes Moth (Tineola bisselliella): A Globally Distributed, Economically Important Pest
Jasmine D Alqassar and others
Genome Biology and Evolution, Volume 16, Issue 12, December 2024, evae266, https://doi.org/10.1093/gbe/evae266
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