1-18 of 18
Authors: Yang Li
Journal Article
Relational similarity-based graph contrastive learning for DTI prediction
Briefings in Bioinformatics, Volume 26, Issue 2, March 2025, bbaf122, https://doi.org/10.1093/bib/bbaf122
Published: 24 March 2025
Journal Article
scTCA: a hybrid Transformer-CNN architecture for imputation and denoising of scDNA-seq data
Briefings in Bioinformatics, Volume 25, Issue 6, November 2024, bbae577, https://doi.org/10.1093/bib/bbae577
Published: 11 November 2024
Journal Article
Enhancer-driven gene regulatory networks inference from single-cell RNA-seq and ATAC-seq data
Briefings in Bioinformatics, Volume 25, Issue 5, September 2024, bbae369, https://doi.org/10.1093/bib/bbae369
Published: 31 July 2024
Journal Article
Biolinguistic graph fusion model for circRNA–miRNA association prediction
Briefings in Bioinformatics, Volume 25, Issue 2, March 2024, bbae058, https://doi.org/10.1093/bib/bbae058
Published: 28 February 2024
Journal Article
Likelihood-based feature representation learning combined with neighborhood information for predicting circRNA–miRNA associations
Briefings in Bioinformatics, Volume 25, Issue 2, March 2024, bbae020, https://doi.org/10.1093/bib/bbae020
Published: 07 February 2024
Journal Article
scMMT: a multi-use deep learning approach for cell annotation, protein prediction and embedding in single-cell RNA-seq data
Briefings in Bioinformatics, Volume 25, Issue 2, March 2024, bbad523, https://doi.org/10.1093/bib/bbad523
Published: 31 January 2024
Journal Article
CEMIG: prediction of the cis-regulatory motif using the de Bruijn graph from ATAC-seq
Briefings in Bioinformatics, Volume 25, Issue 1, January 2024, bbad505, https://doi.org/10.1093/bib/bbad505
Published: 06 January 2024
Journal Article
Identifying local associations in biological time series: algorithms, statistical significance, and applications
Briefings in Bioinformatics, Volume 24, Issue 6, November 2023, bbad390, https://doi.org/10.1093/bib/bbad390
Published: 02 November 2023
Journal Article
End-to-end interpretable disease–gene association prediction
Briefings in Bioinformatics, Volume 24, Issue 3, May 2023, bbad118, https://doi.org/10.1093/bib/bbad118
Published: 28 March 2023
Journal Article
MNMDCDA: prediction of circRNA–disease associations by learning mixed neighborhood information from multiple distances
Briefings in Bioinformatics, Volume 23, Issue 6, November 2022, bbac479, https://doi.org/10.1093/bib/bbac479
Published: 16 November 2022
Journal Article
DAESTB: inferring associations of small molecule–miRNA via a scalable tree boosting model based on deep autoencoder
Briefings in Bioinformatics, Volume 23, Issue 6, November 2022, bbac478, https://doi.org/10.1093/bib/bbac478
Published: 15 November 2022
Journal Article
Scalable batch-correction approach for integrating large-scale single-cell transcriptomes
Briefings in Bioinformatics, Volume 23, Issue 5, September 2022, bbac327, https://doi.org/10.1093/bib/bbac327
Published: 10 August 2022
Journal Article
A universal approach for integrating super large-scale single-cell transcriptomes by exploring gene rankings
Briefings in Bioinformatics, Volume 23, Issue 2, March 2022, bbab573, https://doi.org/10.1093/bib/bbab573
Published: 20 January 2022
Journal Article
Development of interactive biological web applications with R/Shiny
Briefings in Bioinformatics, Volume 23, Issue 1, January 2022, bbab415, https://doi.org/10.1093/bib/bbab415
Published: 12 October 2021
Journal Article
Drug–target interaction predication via multi-channel graph neural networks
Briefings in Bioinformatics, Volume 23, Issue 1, January 2022, bbab346, https://doi.org/10.1093/bib/bbab346
Published: 03 September 2021
Journal Article
An algorithmic perspective of de novo cis-regulatory motif finding based on ChIP-seq data
Briefings in Bioinformatics, Volume 19, Issue 5, September 2018, Pages 1069–1081, https://doi.org/10.1093/bib/bbx026
Published: 08 March 2017
Journal Article
Critical limitations of prognostic signatures based on risk scores summarized from gene expression levels: a case study for resected stage I non-small-cell lung cancer
Briefings in Bioinformatics, Volume 17, Issue 2, March 2016, Pages 233–242, https://doi.org/10.1093/bib/bbv064
Published: 06 August 2015
Journal Article
Semiparametric prognosis models in genomic studies
Briefings in Bioinformatics, Volume 11, Issue 4, July 2010, Pages 385–393, https://doi.org/10.1093/bib/bbp070
Published: 01 February 2010
