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Volume 11, Issue 3, May 2010
Special Issue: Parallel and Ubiquitous Methods and Tools in Systems Biology
Editorial
Editorial: Accelerating systems biology
Tommaso Mazza
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 267–269, https://doi.org/10.1093/bib/bbq012
Papers
BioModels.net Web Services, a free and integrated toolkit for computational modelling software
Chen Li and others
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 270–277, https://doi.org/10.1093/bib/bbp056
CaliBayes and BASIS: integrated tools for the calibration, simulation and storage of biological simulation models
Yuhui Chen and others
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 278–289, https://doi.org/10.1093/bib/bbp072
Flexible experimentation in the modeling and simulation framework JAMES II—implications for computational systems biology
Roland Ewald and others
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 290–300, https://doi.org/10.1093/bib/bbp067
High-performance analysis of biological systems dynamics with the DiVinE model checker
Jiří Barnat and others
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 301–312, https://doi.org/10.1093/bib/bbp074
Simulation of P systems with active membranes on CUDA
José M. Cecilia and others
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 313–322, https://doi.org/10.1093/bib/bbp064
GPU computing for systems biology
Lorenzo Dematté and Davide Prandi
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 323–333, https://doi.org/10.1093/bib/bbq006
High performance cellular level agent-based simulation with FLAME for the GPU
Paul Richmond and others
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 334–347, https://doi.org/10.1093/bib/bbp073
Real-time classification of datasets with hardware embedded neuromorphic neural networks
Laszlo Bako
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 348–363, https://doi.org/10.1093/bib/bbp066
Estimating the divisibility of complex biological networks by sparseness indices
Tommaso Mazza and others
Briefings in Bioinformatics, Volume 11, Issue 3, May 2010, Pages 364–374, https://doi.org/10.1093/bib/bbp060
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